Pairwise Alignments

Query, 407 a.a., type II secretion system F family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., type II secretion system F family protein from Dyella japonica UNC79MFTsu3.2

 Score =  192 bits (489), Expect = 1e-53
 Identities = 114/388 (29%), Positives = 208/388 (53%), Gaps = 8/388 (2%)

Query: 13  GSKASGLVEAATEELAAEMLLNKGIVPTSIAQGAAEKSAFDFNWKALLTPSVPLEVLVIF 72
           G +  G + A    L    L  +G+ P ++     EKS   F   A  +   P +V  IF
Sbjct: 36  GKRMKGEMPAKNASLVKAELRRQGMNPQTVR----EKSKPLFG--AAGSKVKPRDV-AIF 88

Query: 73  CRQMFSLTKAGVPLLRSMRGLAQNCHNKQLKAALDSVCNELTNGRNLSASMQLHPAIFSP 132
            RQ+ ++  +GVP+++S   +A    N + K  L  V   +  G  L  ++  +P  F  
Sbjct: 89  SRQIATMMASGVPMVQSFDIIADGQKNVRFKNMLVDVKQNIEGGAALHEALGKYPVEFDE 148

Query: 133 LFVSMIQVGENTGRLDQALLQLAGYYEQEVETRKRIKTAMRYPTFVITFVLLAMFILNVK 192
           L+ +++  GE+ G LD  L  +A Y E+    + +IK A+ YP  V+   +L   IL + 
Sbjct: 149 LYRNLVHAGESAGVLDTVLDTVATYKERMEGIKSKIKKALFYPVMVLVVAMLVSMILLLF 208

Query: 193 VIPQFTSMFSRFGVDLPLPTRILITTSDFFVNYWGLLLGIIVGLLFAFRAWVNTTNGRIR 252
           V+P F   F   G +LP PT+I+I+ S F  +YW +++G+IVG + A     N +     
Sbjct: 209 VVPVFQQTFKDAGAELPAPTQIVISASQFMQSYWYVVIGVIVGSIVALVMAKNRSPAVAH 268

Query: 253 W-DHLRLRMPIVGDIVNRAQLSRFARTFSLMLSAGVPLNQSLALSAEAIDNKFLEQRILE 311
           + D + LR+P++G+I+ ++ ++RFART  +   AGVPL +++   A A  +      + +
Sbjct: 269 FLDRVMLRLPVIGNILRQSAIARFARTLGVTFRAGVPLVEAMEAVAGATGSIVYGDAVRQ 328

Query: 312 MKSQIESGVAVSATAINANIFTPLVIQMMSVGEETGRIDELLLEVSDFYDREVDYDLKTL 371
           M+  +  G  +        +F  +V+QM ++GEE+G +D +L +V++FY+ EV+  + TL
Sbjct: 329 MRDDVAVGHQLQLAMRQTGLFPNMVVQMTAIGEESGALDNMLFKVAEFYEEEVNNAVDTL 388

Query: 372 TARIEPILLVFVAAMVLVLALGIFLPMW 399
           +  +EP+++V +  +V  + + ++LP++
Sbjct: 389 STLLEPLIMVILGVLVGGMVVSLYLPIF 416