Pairwise Alignments

Query, 407 a.a., type II secretion system F family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., general secretion pathway protein F, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  254 bits (649), Expect = 3e-72
 Identities = 134/401 (33%), Positives = 229/401 (57%)

Query: 1   MATFYYQGRNADGSKASGLVEAATEELAAEMLLNKGIVPTSIAQGAAEKSAFDFNWKALL 60
           MA+F Y  RN +G K  G+++A + E A  +L ++G VP  +  GA    +      A  
Sbjct: 1   MASFSYTARNENGVKMEGVIDAESTEAARAILFSRGYVPLEVKAGAGGGFSLGLGALADA 60

Query: 61  TPSVPLEVLVIFCRQMFSLTKAGVPLLRSMRGLAQNCHNKQLKAALDSVCNELTNGRNLS 120
              +P + L++F +Q  +L +AG+P+ + ++ L     +K+LKA    +   +  G  L 
Sbjct: 61  LSPIPPKELILFTKQFRTLFQAGIPITQLLQVLQNQTEHKRLKAIAAEMSQAIMGGATLY 120

Query: 121 ASMQLHPAIFSPLFVSMIQVGENTGRLDQALLQLAGYYEQEVETRKRIKTAMRYPTFVIT 180
            + + HP +FS L+ SM++ GE +G L + + +L    E E + R  IK+A+RYP  V+ 
Sbjct: 121 DAFRAHPKVFSELYCSMMRAGEASGALGEVMDRLVYLLEHEHKIRSDIKSALRYPKMVMG 180

Query: 181 FVLLAMFILNVKVIPQFTSMFSRFGVDLPLPTRILITTSDFFVNYWGLLLGIIVGLLFAF 240
            + +A F+L   VIP+F  +FS+  + LP PT+I I     F  YW ++L ++V    A+
Sbjct: 181 ALAVAFFVLLNLVIPKFVLIFSQARITLPWPTKIAIGMHYVFSTYWYVVLAVVVAGTVAY 240

Query: 241 RAWVNTTNGRIRWDHLRLRMPIVGDIVNRAQLSRFARTFSLMLSAGVPLNQSLALSAEAI 300
           + WV T +GR   D L LR+P VG ++ ++ ++RFA  F+++ S+GV +  +L +    I
Sbjct: 241 KYWVRTEDGRYWRDRLVLRLPGVGPVIQKSVMARFASIFAILQSSGVSVLDALDVLNNTI 300

Query: 301 DNKFLEQRILEMKSQIESGVAVSATAINANIFTPLVIQMMSVGEETGRIDELLLEVSDFY 360
            N  + +    ++ Q+  G  ++     A  FTPLV+ M+++GEE+G +D +L +V+  Y
Sbjct: 301 GNAAIAREFTRIQDQLREGRGIAEPLRTARFFTPLVVNMVAIGEESGSLDAMLNDVARHY 360

Query: 361 DREVDYDLKTLTARIEPILLVFVAAMVLVLALGIFLPMWGM 401
           D EV+Y +  +   I P+L+V +AA+V   AL IF+PMW +
Sbjct: 361 DEEVEYAVAGMAEAIGPVLIVALAAVVGFFALAIFMPMWDL 401