Pairwise Alignments

Query, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., General secretion pathway protein E from Pseudomonas fluorescens FW300-N2E2

 Score =  326 bits (836), Expect = 1e-93
 Identities = 172/344 (50%), Positives = 234/344 (68%), Gaps = 18/344 (5%)

Query: 171 EITD--SDSDEVTVVKLINSLFEDAIQVGASDIHIEPDANVLRLRQRIDGVLHETLLHEV 228
           EITD     D   V+++IN+L   A +  ASDIHIEP  +   +R R+DG L + +    
Sbjct: 92  EITDLLDTQDGAPVIRMINALLTQAARDEASDIHIEPYESHSVVRYRVDGTLRDVVSPRK 151

Query: 229 NIASALVLRLKLMANLDISEKRLPQDGRFNIRVKGQSVDIRMSTMPIQHGESVVMRLLNQ 288
            +  ALV R+K+MA LDI+EKRLPQDGR  +RV G+ +DIR+ST+P  HGE VVMRLL++
Sbjct: 152 ALHGALVSRIKIMAQLDIAEKRLPQDGRIALRVAGRPIDIRVSTVPTGHGERVVMRLLDK 211

Query: 289 SAGVRKLEESGIPPHLLLRLRHQLKRPHGMILVTGPTGSGKTTTLYGALNELNTSGKKII 348
            AG  +LE  G+ P +L +L H +++PHG++LVTGPTGSGKTT+LY +L  L+ S   I+
Sbjct: 212 QAGRLQLETLGMDPDVLGKLDHLIRQPHGIVLVTGPTGSGKTTSLYASLARLDASVHNIL 271

Query: 349 TAEDPVEYRISRINQVQVNPKINLDFSTLLRTFLRQDPDIILVGEMRDQETVEIGLRAAL 408
           T EDPVEY +  I+Q+QVN KI++ F+  LR  LRQDPDII++GE+RD ET +I ++A+L
Sbjct: 272 TVEDPVEYDLPGISQIQVNAKIDMTFALALRAILRQDPDIIMIGEIRDLETAQIAVQASL 331

Query: 409 TGHLVLSTLHTNDAVDSALRLIDMGAPGYLVASAVRAVVAQRLVRKVCPDCSGHDEVDEA 468
           TGHLVL+TLHTNDAV +  RLIDMG   +L+AS++  V+AQRLVR++CP C         
Sbjct: 332 TGHLVLATLHTNDAVSAINRLIDMGVEPFLLASSMLGVLAQRLVRRLCPQC--------- 382

Query: 469 RRQWLVTRFPNQAAAKFTRGRGCQNCNLTGYRGRIGVFEMLELD 512
                  + P+ A     R  GC +CN TGY GR G+ E+  +D
Sbjct: 383 -------KQPDPATPGTWRPVGCPSCNQTGYSGRTGIHELFCID 419