Pairwise Alignments

Query, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., General secretion pathway protein E from Pseudomonas fluorescens FW300-N2E2

 Score =  338 bits (866), Expect = 4e-97
 Identities = 195/500 (39%), Positives = 292/500 (58%), Gaps = 33/500 (6%)

Query: 82  LPEVHARRLRALVIGRS--------GDTLRIAMSDPADLFAQEALLNQLPDYGFEFVIAP 133
           LP   ARR   L+ G          GDT   A+++   L  ++  +  L    F   +A 
Sbjct: 1   LPFGFARRFGVLLEGEGPTLSLVMRGDTPLTAVAEVRRLCGRDLPIQVLEPTLFAARLAS 60

Query: 134 --------EKQLVDGFDRYYRRTKEIVSFAEQLHAEHKTNDSFDFEITDSDSDEVTVVKL 185
                    +Q+  G D       +++S A+Q+    +T D  +         +  +++L
Sbjct: 61  VYRQGQSAAEQVAQGLDEEL----DLLSLADQMP---QTTDLLE------QQGDAPIIRL 107

Query: 186 INSLFEDAIQVGASDIHIEPDANVLRLRQRIDGVLHETLLHEVNIASALVLRLKLMANLD 245
           IN+L  +A++  ASD+H+E     L +R RIDG L E L     +A+ LV R+K+MA LD
Sbjct: 108 INALLSEAVREQASDVHLETFEQYLSVRMRIDGQLQEMLRPRRELANLLVSRIKVMARLD 167

Query: 246 ISEKRLPQDGRFNIRVKGQSVDIRMSTMPIQHGESVVMRLLNQSAGVRKLEESGIPPHLL 305
           I+EKR+PQDGR  +R+ G  VD+R+ST+P  HGE VV+RLL++ AG   L   G+P   L
Sbjct: 168 IAEKRVPQDGRMALRLAGHEVDVRVSTLPSAHGERVVLRLLDKQAGRLDLHRLGLPDDTL 227

Query: 306 LRLRHQLKRPHGMILVTGPTGSGKTTTLYGALNELNTSGKKIITAEDPVEYRISRINQVQ 365
             LR  L +PHG++LVTGPTGSGKTT+LY AL+ +N   + I+T EDP+EY +  I Q+ 
Sbjct: 228 ADLRLLLGKPHGIVLVTGPTGSGKTTSLYAALSSINDQSRNILTVEDPIEYHLPGIGQMP 287

Query: 366 VNPKINLDFSTLLRTFLRQDPDIILVGEMRDQETVEIGLRAALTGHLVLSTLHTNDAVDS 425
           VNPK+++ F+  LR  LRQDPD+++VGE+RD+ET EI ++A+LTGHLVLSTLHTN AV +
Sbjct: 288 VNPKVDMTFARGLRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTLHTNTAVGA 347

Query: 426 ALRLIDMGAPGYLVASAVRAVVAQRLVRKVCPDCSGHDEVDEARRQWLVTRFPNQAAAKF 485
             RL+DMG   YL+AS++  +VAQRL+R +CP C      D A  + L       AA + 
Sbjct: 348 VTRLVDMGVDAYLLASSLAGIVAQRLLRALCPSCKTPYVADAATCRRL--GLDAGAAPRL 405

Query: 486 TRGRGCQNCNLTGYRGRIGVFEMLELDQPMMDCLRANDAVAFSKAARSNTDYKPLLASAM 545
            + +GC+ C   GYRGR G++E++ +   +   +    A   + AA +    + L     
Sbjct: 406 FKAQGCEQCQ-KGYRGRFGIYELVNVGAALSQLIH-QGATEQALAAEARKTSRSLFQDGR 463

Query: 546 ELALQGIVSLDEVMSLGEGD 565
           +  L+G+ S+DE++ + + D
Sbjct: 464 QRVLEGLTSVDELLRITQED 483