Pairwise Alignments

Query, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., type IV-A pilus assembly ATPase PilB from Pseudomonas stutzeri RCH2

 Score =  325 bits (834), Expect = 2e-93
 Identities = 198/553 (35%), Positives = 304/553 (54%), Gaps = 13/553 (2%)

Query: 14  LVEEGIVSEAQLEQALNAQKNTGRRLGDTLISLGFLSETQLLNFLAQQLSLPVIDLSRAH 73
           +V  G++ E   +QA      +        +    ++   +    ++Q  + ++DL    
Sbjct: 14  VVGAGVLDERTAQQAQAQALRSKTPFVTYAVQNRLVNGRVIAELASEQFGVALLDLGALD 73

Query: 74  VDIDAVPLLPEVHARRLRALVIGRSGDTLRIAMSDPADLFAQEALLNQLPDYGFEFVIAP 133
            ++    L+ E  A++ R L + + G  L IA+SDPA+     A +        E ++  
Sbjct: 74  KELLPKDLISEKLAKQHRVLPLSKRGTKLFIAISDPAN-HQSIADIQFSTGLSIEPILVE 132

Query: 134 EKQLVDGFDRYYRRTKEIVSFAEQLHAE----HKTNDSFDFEITDSDSDEVTVVKLINSL 189
           + +L +  D+ Y      +     +  +       +D    +     +D+  VV+ +N +
Sbjct: 133 DDKLGEAIDKLYDNGSTGLEDLGDVDLDGVDVESVSDDGKGDEAGETADDAPVVRFVNKM 192

Query: 190 FEDAIQVGASDIHIEPDANVLRLRQRIDGVLHETLLHEVNIASALVLRLKLMANLDISEK 249
             DAI+ G+SD+H EP     R+R R DG+LHE     + +A  +  RLK+MA LDISE+
Sbjct: 193 LLDAIRGGSSDLHFEPYEKAFRVRLRTDGILHEVARPPIQLAPRISARLKVMAGLDISER 252

Query: 250 RLPQDGRFNIRV-KGQSVDIRMSTMPIQHGESVVMRLLNQSAGVRKLEESGIPPHLLLRL 308
           R PQDGR  +++ K +++D R++T+P   GE +VMR+L+ S+    ++  G         
Sbjct: 253 RRPQDGRIKMKLSKNKAIDFRVNTLPTLWGEKIVMRILDPSSAQMGIDALGYEEDQKELY 312

Query: 309 RHQLKRPHGMILVTGPTGSGKTTTLYGALNELNTSGKKIITAEDPVEYRISRINQVQVNP 368
            + LK+P GMILVTGPTGSGKT +LY  LN LNT    I TAEDPVE  +  INQV VNP
Sbjct: 313 MNALKQPQGMILVTGPTGSGKTVSLYTGLNILNTVDVNISTAEDPVEINLEGINQVNVNP 372

Query: 369 KINLDFSTLLRTFLRQDPDIILVGEMRDQETVEIGLRAALTGHLVLSTLHTNDAVDSALR 428
           +  +DFS  LR FLRQDPDII+VGE+RD ET EI ++AA TGH+V+STLHTN A ++  R
Sbjct: 373 RQGMDFSQALRAFLRQDPDIIMVGEIRDLETAEIAIKAAQTGHMVMSTLHTNSAAETLTR 432

Query: 429 LIDMGAPGYLVASAVRAVVAQRLVRKVCPDCSGHDEVDEARRQWLVTRFPNQ--AAAKFT 486
           L +MG   + +A++V  ++AQRL RK+C  C    EV+  R   L   FP     A K  
Sbjct: 433 LRNMGVAAFNIATSVNLIIAQRLARKLCNSCK--KEVELPREALLGEGFPADKIGAFKIY 490

Query: 487 RGRGCQNCNLTGYRGRIGVFEMLELDQPMMDCLRANDAVAFSKAARSNTD-YKPLLASAM 545
              GC NC   GY+GR+G++E+++ + P +  +   D  +   + +   D +  L  SA+
Sbjct: 491 GPVGCDNCK-GGYKGRVGIYEVVK-NTPALARIIMEDGNSIDISTQMRKDGFNDLRTSAL 548

Query: 546 ELALQGIVSLDEV 558
             A+QG+ SL+EV
Sbjct: 549 VKAMQGVTSLEEV 561