Pairwise Alignments

Query, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., type II secretion system protein E (GspE) from Pseudomonas syringae pv. syringae B728a

 Score =  357 bits (917), Expect = e-103
 Identities = 217/558 (38%), Positives = 325/558 (58%), Gaps = 10/558 (1%)

Query: 14  LVEEGIVSEAQLEQALNAQKNT-GRRLGDTLISLGFLSETQLLNFLAQQLSLPVIDLSRA 72
           L+E   +  A LE+A   Q+ + G  L   L  LG +SE +L    A  L  P++     
Sbjct: 34  LIENAGLKTADLERAQRLQQESEGTELLGLLTRLGLVSEFELARAWAALLQAPLLLADAV 93

Query: 73  HVDIDAVPLLPEVHARRLRALVIGRSGDTLRIAMSDPADLFAQEALLNQLPDYGFEFVIA 132
              +D +P L E   R  + + +G S   L++  ++P  L+  +A+     +      I 
Sbjct: 94  PPLLDPLPPLTERFMRHYQVVPVGWSDQGLQVLSANPGTLYPFQAIAYAC-EVPVRLSIG 152

Query: 133 PEKQLVDGFDRYYRRTKEIV-SFAEQLHAEHKTNDSFDFEITDSDSDEVTVVKLINSLFE 191
           P  ++    +RYY + +  + +  E L  E  + +  D E     + E  V++L+N + +
Sbjct: 153 PRNEVETLIERYYGQGRSAMGTLIENLDEEGGSLE--DIEHLKDLASEAPVIRLVNLILQ 210

Query: 192 DAIQVGASDIHIEPDANVLRLRQRIDGVLHETLLHEVNIASALVLRLKLMANLDISEKRL 251
            A++  ASDIHIEP  + L++R RIDGVLHE      + ++A++ R+K+MA LDI+E+RL
Sbjct: 211 RAVEQRASDIHIEPFESQLKVRYRIDGVLHEAEAPPSSSSAAVISRVKIMARLDIAERRL 270

Query: 252 PQDGRFNIRVKGQSVDIRMSTMPIQHGESVVMRLLNQSAGVRKLEESGIPPHLLLRLRHQ 311
           PQDGR  +R++G+ +D+R+ST+P   GESVVMRLL++          G     L      
Sbjct: 271 PQDGRIMLRIQGKELDLRVSTVPTSFGESVVMRLLDRQTINFDFPSLGFDGERLDEFLDV 330

Query: 312 LKRPHGMILVTGPTGSGKTTTLYGALNELNTSGKKIITAEDPVEYRISRINQVQVNPKIN 371
           L+RPHG++LVTGPTGSGKTTTLY AL+ LNT+ +KIIT EDPVEY++  INQ+QV P I 
Sbjct: 331 LERPHGILLVTGPTGSGKTTTLYTALSRLNTAERKIITVEDPVEYQLEGINQIQVKPSIG 390

Query: 372 LDFSTLLRTFLRQDPDIILVGEMRDQETVEIGLRAALTGHLVLSTLHTNDAVDSALRLID 431
           LDF+  LR+ +RQDPD+I++GEMRD ET  I ++++LTGHLVLSTLHTN A  S  RL+D
Sbjct: 391 LDFAGALRSIVRQDPDVIMIGEMRDLETCRIAIQSSLTGHLVLSTLHTNSAAASITRLLD 450

Query: 432 MGAPGYLVASAVRAVVAQRLVRKVCPDC-SGHDEVDEARRQWLVTRFPNQAAAKFTRGRG 490
           MG   YL+AS V  ++AQRLVR++ P      D   E   +  + RF ++   +  R R 
Sbjct: 451 MGVESYLIASTVNGILAQRLVRRLDPATREAFDAPPELIAEHGLERFTDERPIRLYRPRA 510

Query: 491 CQNCNLTGYRGRIGVFEMLELDQPMMDCL-RANDAVAFSKAARSNTDYKPLLASAMELAL 549
             +    GYRGR  + E+L +++ +   L R  DA    +AAR     + L    +  A+
Sbjct: 511 --DAPGGGYRGRSAITELLVMNEELRSLLMRHADASTLEEAARRG-GLRTLHEEGLRQAV 567

Query: 550 QGIVSLDEVMSLGEGDSS 567
            G+ SL+EV+ +  G+ +
Sbjct: 568 AGVTSLEEVLRVTRGEGT 585