Pairwise Alignments

Query, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., type II secretion system protein E:General secretory system II, protein E, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  345 bits (885), Expect = 3e-99
 Identities = 212/560 (37%), Positives = 321/560 (57%), Gaps = 21/560 (3%)

Query: 10  LGDLLVEEGIVSEAQLEQALNAQKNTGRRLGDTLISLGFLSETQLLNFLAQQLSLPVIDL 69
           L   LV   +++E   +QA    +     L   L+    +    L    + Q  +P +DL
Sbjct: 9   LAKQLVLAELLTEPVAQQAYQQARRDKISLVSYLVQHKLVKSLTLAELASDQFGVPFMDL 68

Query: 70  SRAHVDIDAVP--LLPEVHARRLRALVIGRSGDTLRIAMSDPADLFAQEALLNQLPDYGF 127
             A +D +++P  L+ E   R+  AL + R G+ L I +SDP +  A   +         
Sbjct: 69  --ASLDKESLPKGLVSEKLVRQHHALPLWRRGNKLFIGISDPTNHQAVTEIQFST-GLNT 125

Query: 128 EFVIAPEKQLVDGFDRYYRRTKEIVSFAE-QLHAEHKTNDSFDFEI-TDSDSDEVTVVKL 185
           E ++  + +L    DR++     + +  +  L  + +  D  +  + T +D+D+  VV+ 
Sbjct: 126 EAILVEDDKLTVAIDRFFDSDSGLGNLEDVDLGLDIEPADGKETTLATQNDADDAPVVRF 185

Query: 186 INSLFEDAIQVGASDIHIEPDANVLRLRQRIDGVLHETLLHEVNIASALVLRLKLMANLD 245
           +N +  DAI++G+SD+H EP   + R+R R DG+LHE     +++A+ +  RLK+MA+LD
Sbjct: 186 VNKMLMDAIRLGSSDLHFEPYEKIFRVRLRTDGILHEVARPPIHLANRIAARLKVMASLD 245

Query: 246 ISEKRLPQDGRFNIRV-KGQSVDIRMSTMPIQHGESVVMRLLNQSAGVRKLEESGIPPHL 304
           ISE+R PQDGR  +RV K +++D RM+T+P   GE +VMR+L+ ++    ++  G  P  
Sbjct: 246 ISERRKPQDGRVKLRVSKTKAIDFRMNTLPTLWGEKIVMRILDPTSAQMGIDALGYEPDQ 305

Query: 305 LLRLRHQLKRPHGMILVTGPTGSGKTTTLYGALNELNTSGKKIITAEDPVEYRISRINQV 364
                  LK P GMILVTGPTGSGKT +LY  LN LNT    I TAEDPVE  +  INQV
Sbjct: 306 KALYLEALKLPQGMILVTGPTGSGKTVSLYTGLNILNTVDINISTAEDPVEINLEGINQV 365

Query: 365 QVNPKINLDFSTLLRTFLRQDPDIILVGEMRDQETVEIGLRAALTGHLVLSTLHTNDAVD 424
            VNP+  LDFS  LR FLRQDPD+I+VGE+RD ET EI ++A+ TGH+VLSTLHTN A +
Sbjct: 366 NVNPRQGLDFSQALRAFLRQDPDVIMVGEIRDLETAEIAIKASQTGHMVLSTLHTNSAAE 425

Query: 425 SALRLIDMGAPGYLVASAVRAVVAQRLVRKVCPDCSGHDEVDEARRQWLVTRFPNQAAAK 484
           +  RL  MG   + +A+A+  ++AQRL RK+C  C    E+D  R   +   FP      
Sbjct: 426 TLTRLHHMGVAAFNIATAINLIIAQRLARKLCSHCK--KELDIPRETLIQEGFPEAKIGT 483

Query: 485 FT--RGRGCQNCNLTGYRGRIGVFEML----ELDQPMMDCLRANDAVAFSKAARSNTDYK 538
           F      GC++CN  GYRGR+G++E++    EL++ +M+     +++  S+  R +  + 
Sbjct: 484 FKVYGPVGCEHCN-GGYRGRVGIYEVVKKTPELERIIME---EGNSLEISRQMRKD-GFN 538

Query: 539 PLLASAMELALQGIVSLDEV 558
            L  S +  A+QGI SL+EV
Sbjct: 539 DLRTSGLSKAMQGITSLEEV 558