Pairwise Alignments

Query, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., MSHA biogenesis protein MshE (RefSeq) from Shewanella amazonensis SB2B

 Score =  647 bits (1669), Expect = 0.0
 Identities = 340/563 (60%), Positives = 430/563 (76%), Gaps = 4/563 (0%)

Query: 5   KLRKRLGDLLVEEGIVSEAQLEQALNAQKNTGRRLGDTLISLGFLSETQLLNFLAQQLSL 64
           KL+ RLGDLLV E I+ E QL  AL  QK+TGR+LG TLI +G+++E QLL FL+QQL++
Sbjct: 4   KLKMRLGDLLVSEQIIGEDQLTAALAQQKSTGRKLGRTLIDMGYIAEDQLLKFLSQQLNI 63

Query: 65  PVIDLSRAHVDIDAVPLLPEVHARRLRALVIGRSGDTLRIAMSDPADLFAQEALLNQLPD 124
           P +D+SR  V    V LLPEV ARR RALVI   GD + +AMSDPADL A + L   L  
Sbjct: 64  PYLDISRRPVPPAVVNLLPEVQARRYRALVIEDKGDAVVVAMSDPADLQALDNLEVLLAP 123

Query: 125 YGFEFVIAPEKQLVDGFDRYYRRTKEIVSFAEQLHAEHKTNDSFDFE-ITDSDSD-EVTV 182
              + V+APE QL+  FD  YRRT++I   A QL  E+  +++FD   +T  DSD E TV
Sbjct: 124 KRLDLVVAPEAQLMQAFDNLYRRTEQIAQMAGQLEEEYAADEAFDLAALTAGDSDSETTV 183

Query: 183 VKLINSLFEDAIQVGASDIHIEPDANVLRLRQRIDGVLHETLLHEVNIASALVLRLKLMA 242
           VKL+ S+FEDA+Q+ ASDIHIEP    LR+RQR+DG L ET+L+EV IA+ALVLRLKLMA
Sbjct: 184 VKLLQSIFEDAVQMRASDIHIEPGDKSLRIRQRVDGHLQETILNEVTIAAALVLRLKLMA 243

Query: 243 NLDISEKRLPQDGRFNIRVKGQSVDIRMSTMPIQHGESVVMRLLNQSAGVRKLEESGIPP 302
            LDISEKRLPQDGRF++ VKG  +D+R+STMPI HGESVVMRLL+QSAG+  L E+G+P 
Sbjct: 244 GLDISEKRLPQDGRFHMEVKGHKIDVRISTMPIYHGESVVMRLLDQSAGLLTLNETGMPD 303

Query: 303 HLLLRLRHQLKRPHGMILVTGPTGSGKTTTLYGALNELNTSGKKIITAEDPVEYRISRIN 362
            +L R+R Q+KRPHGM+LVTGPTGSGKTTTLYG L+ELNT+ +KIIT EDPVEY++ RIN
Sbjct: 304 AILQRVRKQIKRPHGMLLVTGPTGSGKTTTLYGILSELNTADRKIITVEDPVEYQLPRIN 363

Query: 363 QVQVNPKINLDFSTLLRTFLRQDPDIILVGEMRDQETVEIGLRAALTGHLVLSTLHTNDA 422
           QVQVN KI L+FS +LRT LRQDPDII+VGEMRD ETVEIGLR ALTGH VLSTLHTNDA
Sbjct: 364 QVQVNHKIGLNFSNVLRTTLRQDPDIIMVGEMRDHETVEIGLRGALTGHFVLSTLHTNDA 423

Query: 423 VDSALRLIDMGAPGYLVASAVRAVVAQRLVRKVCPDCSGHDEVDEARRQWL--VTRFPNQ 480
           V SALRL+DMGA  YLVASA+R ++AQRLVR+VC +C+   ++    + WL  V++  + 
Sbjct: 424 VTSALRLLDMGAASYLVASALRVIIAQRLVRRVCQNCAVDYQLTSQDKAWLTSVSKGVDF 483

Query: 481 AAAKFTRGRGCQNCNLTGYRGRIGVFEMLELDQPMMDCLRANDAVAFSKAARSNTDYKPL 540
           + A+F  G GCQ+C+ TGYRGRIG+FE+LELD+ M+D +R  +  AF++AA ++ ++ PL
Sbjct: 484 SQARFRMGTGCQSCSGTGYRGRIGIFELLELDEAMVDAMRTGNPQAFAQAAYASPNFTPL 543

Query: 541 LASAMELALQGIVSLDEVMSLGE 563
           L SA+    QG+ +++EV  L E
Sbjct: 544 LISALNYLKQGMTTIEEVARLVE 566