Pairwise Alignments

Query, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., general secretion pathway protein E (RefSeq) from Shewanella amazonensis SB2B

 Score =  326 bits (836), Expect = 1e-93
 Identities = 171/383 (44%), Positives = 248/383 (64%), Gaps = 6/383 (1%)

Query: 178 DEVTVVKLINSLFEDAIQVGASDIHIEPDANVLRLRQRIDGVLHETLLHEVNIASALVLR 237
           D+  +++LIN+L  +AI+  ASDIHIE     L +R R+DGVL E L     ++S LV R
Sbjct: 137 DDAPIIRLINALLSEAIKEEASDIHIETYEKQLVVRFRVDGVLKEVLKPNRKLSSLLVSR 196

Query: 238 LKLMANLDISEKRLPQDGRFNIRVKGQSVDIRMSTMPIQHGESVVMRLLNQSAGVRKLEE 297
           +K+MA LDI+EKR+PQDGR ++R+ G++VD+R+STMP  HGE VV+RLL+++AG   L +
Sbjct: 197 IKVMARLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVLRLLDKNAGNLDLAQ 256

Query: 298 SGIPPHLLLRLRHQLKRPHGMILVTGPTGSGKTTTLYGALNELNTSGKKIITAEDPVEYR 357
            G+   +  +    +++PHG++LVTGPTGSGK+TTLY  L E+N+    I+T EDP+EY 
Sbjct: 257 LGMTETIREQFDELIRKPHGILLVTGPTGSGKSTTLYAGLTEINSRDTNILTVEDPIEYE 316

Query: 358 ISRINQVQVNPKINLDFSTLLRTFLRQDPDIILVGEMRDQETVEIGLRAALTGHLVLSTL 417
           +  I Q QVN K+++ F+  LR  LRQDPD++++GE+RD ET +I ++A+LTGHLV+STL
Sbjct: 317 LEGIGQTQVNTKVDMTFARGLRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVISTL 376

Query: 418 HTNDAVDSALRLIDMGAPGYLVASAVRAVVAQRLVRKVCPDCSGHDEVDEARRQWLVTRF 477
           HTN A  +  RL DMG   +LV+S++  V+AQRLVR +CP C      DE  R+ L    
Sbjct: 377 HTNTASGAITRLQDMGVEPFLVSSSLLGVLAQRLVRTLCPSCKAPHVPDERERELLGI-- 434

Query: 478 PNQAAAKFTRGRGCQNCNLTGYRGRIGVFEMLELDQPMMDCLR-ANDAVAFSKAARSNTD 536
                A   R  GC+ C   GYRGR G+ E+L +D  + + +      +A  K  R +  
Sbjct: 435 -GGGDAVIYRATGCKACGHNGYRGRTGIHELLLVDDTVRELIHGGRGELAIEKYIRQSV- 492

Query: 537 YKPLLASAMELALQGIVSLDEVM 559
              +    M+  L GI +L+EV+
Sbjct: 493 -PSIRHDGMQKVLAGITTLEEVL 514