Pairwise Alignments

Query, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

Subject, 569 a.a., type IV-A pilus assembly ATPase PilB (RefSeq) from Shewanella loihica PV-4

 Score =  350 bits (898), Expect = e-101
 Identities = 215/576 (37%), Positives = 327/576 (56%), Gaps = 31/576 (5%)

Query: 1   MPINKLRKRLGDLLVEEGIVSEAQLEQALNAQKNTGRRLGDTLISLGFLSETQLLNFLAQ 60
           MP   L   L  L + +G++SE QL +A++  +   + L  TLI+   LS  ++     +
Sbjct: 1   MPSTGLHLGLSTLFIRKGLLSEEQLSEAVDLSRKNKQPLVSTLIATKVLSAREVAELCYE 60

Query: 61  QLSLPVIDLSRAHVDIDAVP--LLPEVHARRLRALVIGRSGDTLRIAMSDPADLFAQEAL 118
           +   P++DL+    DI ++P   L +    + + L + + G+ L I  SDP ++ A E  
Sbjct: 61  EYGTPLLDLNE--FDISSIPEAFLNKKLIEKHKCLPLFKRGNRLYIGTSDPTNIAALE-- 116

Query: 119 LNQLPDYGFEFVIAPEKQLVDGFDRYYRRTKEIVSFAEQLHAEHKTNDSFD-FEITDSD- 176
                D+ F   +  E  LV+         K +      L  +    DS    EITD+D 
Sbjct: 117 -----DFQFSAGLHAEAILVEDDKLTVALEKVLEEDISALDLDGIDEDSLSGIEITDTDK 171

Query: 177 ---------SDEVTVVKLINSLFEDAIQVGASDIHIEPDANVLRLRQRIDGVLHETLLHE 227
                    SD+  +V  IN +  DAI+ GASD+H EP     R+R RIDG+LHE     
Sbjct: 172 RQEEQQGDASDDAPIVIYINKILTDAIRKGASDLHFEPYEKRYRIRFRIDGILHEVSEPP 231

Query: 228 VNIASALVLRLKLMANLDISEKRLPQDGRFNIRV-KGQSVDIRMSTMPIQHGESVVMRLL 286
           VN++  +  RLK+M+ LDI+E+R+PQDGR  +++ + +S+D R+ST+P   GE +VMR+L
Sbjct: 232 VNLSGRISARLKVMSKLDIAERRVPQDGRIKMKLSRTKSIDFRVSTLPTIWGEKIVMRIL 291

Query: 287 NQSAGVRKLEESGIPPHLLLRLRHQLKRPHGMILVTGPTGSGKTTTLYGALNELNTSGKK 346
           + S+    +E+ G            L +P GMILVTGPTGSGKT +LY  LN LNT  + 
Sbjct: 292 DSSSAQLGIEKLGYENDQRKLYEEMLAKPQGMILVTGPTGSGKTVSLYTGLNILNTEERN 351

Query: 347 IITAEDPVEYRISRINQVQVNPKINLDFSTLLRTFLRQDPDIILVGEMRDQETVEIGLRA 406
           I TAEDPVE  +  +NQV +N K  L F++ LR+FLRQDPD+++VGE+RD ET EI ++A
Sbjct: 352 ISTAEDPVEINLEGVNQVHINLKAGLTFASALRSFLRQDPDVVMVGEIRDLETAEIAIKA 411

Query: 407 ALTGHLVLSTLHTNDAVDSALRLIDMGAPGYLVASAVRAVVAQRLVRKVCPDCSGHDEVD 466
           A TGHLVLSTLHTN A ++  RLI+MG PGY +AS+V  ++AQRL R++C +C   +EV 
Sbjct: 412 AQTGHLVLSTLHTNSAAETLTRLINMGVPGYNIASSVNLIIAQRLARRLCTECRQPEEVP 471

Query: 467 EARRQWLVTRFPN-QAAAKFT--RGRGCQNCNLTGYRGRIGVFEMLEL-DQPMMDCLRAN 522
           E   + L   F   Q    FT  +  GC  C+  GY+GR+G++E++++ D+     +   
Sbjct: 472 E--HELLKLGFTQAQIDEGFTVYKPVGCDLCS-GGYKGRVGIYEVMKMSDEIARTIMEGG 528

Query: 523 DAVAFSKAARSNTDYKPLLASAMELALQGIVSLDEV 558
           +++  +  A+     + L  S +   + G+ S+ E+
Sbjct: 529 NSLQIATQAKEQ-GMRDLRESGLRKVIAGVTSIAEI 563