Pairwise Alignments

Query, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

Subject, 568 a.a., type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Dechlorosoma suillum PS

 Score =  376 bits (966), Expect = e-108
 Identities = 220/560 (39%), Positives = 330/560 (58%), Gaps = 17/560 (3%)

Query: 7   RKRLGDLLVEEGIVSEAQLEQALNAQKNTGRRLGDTLISLGFLSETQLLNFLAQQLSLPV 66
           R+ LG +L+ +GI+SE QL  AL  Q  + + +G  L+SLGF+SET L   L++ L    
Sbjct: 8   RRPLGQILIAQGIISEDQLRIALLEQMKSNQPVGKLLVSLGFVSETTLREALSESLGKRS 67

Query: 67  IDLSRAHVDIDAVPLLPEVHARRLRALVIGRSGDT--LRIAMSDPADLFAQEALLNQL-P 123
           IDLSRA +D  A+ L+P   A+R   L +    ++  L +A++D  D+ A + + +QL  
Sbjct: 68  IDLSRAVIDPSALKLVPRELAKRHHILPLDFDAESHRLTLALADINDIVALDKVRSQLNA 127

Query: 124 DYGFEFVIAPEKQLVDGFDRYYRRTKEIVSFAEQLHAEHKTNDSFDFEITDSDSDEVT-- 181
           +   E ++A E ++    D+YY     I     ++          D++   S SDE +  
Sbjct: 128 ELEIETLLAGESEIDRAIDQYYGYELSIDGILHEIET-----GEIDWKSLQSSSDEYSQP 182

Query: 182 VVKLINSLFEDAIQVGASDIHIEPDANVLRLRQRIDGVLHETLLHEVNIASALVLRLKLM 241
           VV+LI+++  DA++  ASD+H EP+AN LR+R RIDG+L +      +   A+ +R+K+M
Sbjct: 183 VVRLIDAILADAVKRDASDVHFEPEANFLRIRYRIDGMLRQIRALHKSYWPAMAVRIKVM 242

Query: 242 ANLDISEKRLPQDGRFNIRVKGQSVDIRMSTMPIQHGESVVMRLLNQSAGVRKLEESGIP 301
           + ++I+E R PQDGR N+ + G+ VD R++  P  HGE+VV+R+L++  G+  LE  G+ 
Sbjct: 243 SGMNIAETRAPQDGRINLVLSGRQVDFRVAAQPTIHGENVVLRILDRQKGIVPLEGLGLA 302

Query: 302 PHLLLRLRHQLKRPHGMILVTGPTGSGKTTTLYGALNELNTSGKKIITAEDPVEYRISRI 361
              L  L+  + RP G+ILVTGPTGSGKTTTLY  LN +N+ G  I+T EDPVEY ++ +
Sbjct: 303 EDHLDLLKLMIARPEGIILVTGPTGSGKTTTLYSVLNHINSEGVNIMTLEDPVEYPMALV 362

Query: 362 NQVQVNPKINLDFSTLLRTFLRQDPDIILVGEMRDQETVEIGLRAALTGHLVLSTLHTND 421
            Q  V     LDF+  +R+ +RQDPD+ILVGE+RD +T E+  RAA+TGH V STLHTN 
Sbjct: 363 RQTSVAESAKLDFANGIRSMMRQDPDVILVGEIRDTDTAEMAFRAAMTGHQVYSTLHTNS 422

Query: 422 AVDSALRLIDMGAPGYLVASAVRAVVAQRLVRKVCPDCSG--HDEVDEARRQWLVTRFPN 479
           A+ +  RL+D+G    L+A  +  +VAQRLVR++CP C      E  E+R   +    P 
Sbjct: 423 AIGAIPRLLDIGILPDLMAGNIIGIVAQRLVRRLCPGCKTPYQAEAHESRLLGIPAEGPR 482

Query: 480 QAAAKFTRGRGCQNCNLTGYRGRIGVFEMLELDQPMMDCLRANDAVAFS-KAARSNTDYK 538
                     GC+ C+  GYRGRI + E+L +  P MD L A  A A   +   +   ++
Sbjct: 483 PV---IYHPCGCERCDFQGYRGRIAIMELLRM-TPAMDELVARRATARDIRNEATRQGFR 538

Query: 539 PLLASAMELALQGIVSLDEV 558
           PL    +   L G  SL+E+
Sbjct: 539 PLADDGLRRVLDGSTSLEEL 558