Pairwise Alignments

Query, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

Subject, 573 a.a., general secretion pathway protein E, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  358 bits (919), Expect = e-103
 Identities = 216/562 (38%), Positives = 327/562 (58%), Gaps = 12/562 (2%)

Query: 7   RKRLGDLLVEEGIVSEAQLEQALNAQKNTGRRLGDTLISLGFLSETQLLNFLAQQLSLPV 66
           R RLG+LLVE GI+S+ QL+ AL   K +G RLG  LI  G   E  ++  +++QL +  
Sbjct: 4   RVRLGELLVEAGIISDEQLKVALRDHKKSGLRLGQFLIKTGVCREGDVVATVSRQLRIDR 63

Query: 67  IDLSRAHVDIDAVPLLPEVHARRLRALVIGRSGDTLRIAMSDPADLFAQEALLNQLPDYG 126
                  + ++    LP   A++  A+ + + G  L +AM+DP D+ A + +     +  
Sbjct: 64  YSPQDFPLSLNMAERLPLETAQKCNAVPLQQHGHVLVVAMTDPLDIDACDTI-EFATNSE 122

Query: 127 FEFVIAPEKQLVDGFDRYYRRTKEIVSFAEQLHAEH-------KTND-SFDFEITDSDSD 178
            E VI  E++    F   Y     +    E L   H       +T D     E   S +D
Sbjct: 123 VEPVICTEQEFNQLFSAVYGMFTNLDGVIESLGDLHTATAAKTETEDRDVALEELASQAD 182

Query: 179 EVTVVKLINSLFEDAIQVGASDIHIEPDANVLRLRQRIDGVLHETLLHEVNIASALVLRL 238
              VV+L+NS+   A++ GASD+HI P+ +  ++R RIDG L E      N+A A+V RL
Sbjct: 183 LAPVVRLVNSILAQAVREGASDVHISPEKDSRQVRFRIDGKLREAPAPPKNVAPAMVSRL 242

Query: 239 KLMANLDISEKRLPQDGRFNIRVKGQSVDIRMSTMPIQHGESVVMRLLNQSAGVRKLEES 298
           K++ N+DI+  R+PQDGRF + +  + +++R+S++P  +GE++V+RLL+ S     L++ 
Sbjct: 243 KILGNMDIAVTRVPQDGRFTMNLDNREINVRVSSIPTIYGENMVLRLLDMSGRDYTLDQL 302

Query: 299 GIPPHLLLRLRHQLKRPHGMILVTGPTGSGKTTTLYGALNELNTSGKKIITAEDPVEYRI 358
           G+       ++  + +P+GMIL TGPTGSGK+T+LY  L  +NT    IIT EDPVEYRI
Sbjct: 303 GMEQTDHTVIKRVIHKPYGMILSTGPTGSGKSTSLYAILKSINTPEINIITLEDPVEYRI 362

Query: 359 SRINQVQVNPKINLDFSTLLRTFLRQDPDIILVGEMRDQETVEIGLRAALTGHLVLSTLH 418
             I QVQ+N K  + F++ LR+ LRQDPD+++VGE+RD ET  I ++AALTGHLVLSTLH
Sbjct: 363 GGIRQVQLNRKAGMTFASGLRSILRQDPDVVMVGEIRDAETASIAVQAALTGHLVLSTLH 422

Query: 419 TNDAVDSALRLIDMGAPGYLVASAVRAVVAQRLVRKVCPDCS-GHDEVDEARRQWLVTRF 477
           TNDA  +  RLIDMG   +LV+S + A  AQRLVR+VCP+C+  +D    A   + +   
Sbjct: 423 TNDAAGAVTRLIDMGIEPFLVSSVMLASFAQRLVRRVCPNCAEPYDPPHAALAAFGIDPA 482

Query: 478 P-NQAAAKFTRGRGCQNCNLTGYRGRIGVFEMLELDQPMMD-CLRANDAVAFSKAARSNT 535
             +   ++F +GRGC +C  TGYRGR G+FE+L +   + +  +R +     +  A    
Sbjct: 483 EGHDGRSRFLKGRGCFHCAHTGYRGRTGLFEILPMVPEIQELVVRRSSTQVIANTAIEAG 542

Query: 536 DYKPLLASAMELALQGIVSLDE 557
             + L+  A      GI +++E
Sbjct: 543 LMRTLVQDAALKVRAGITTVEE 564