Pairwise Alignments

Query, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

Subject, 569 a.a., type IV-A pilus assembly ATPase PilB (RefSeq) from Shewanella sp. ANA-3

 Score =  352 bits (904), Expect = e-101
 Identities = 210/574 (36%), Positives = 328/574 (57%), Gaps = 27/574 (4%)

Query: 1   MPINKLRKRLGDLLVEEGIVSEAQLEQALNAQKNTGRRLGDTLISLGFLSETQLLNFLAQ 60
           MP   L   L  L + +G+++E Q+  A+   +   + L  TL+    +S   +     +
Sbjct: 1   MPSAGLHLGLSTLFIRKGLLNEEQMASAITKSRQNKQTLVTTLVQTKLVSARSIAELCYE 60

Query: 61  QLSLPVIDLSRAHVDIDAVP--LLPEVHARRLRALVIGRSGDTLRIAMSDPADLFAQEAL 118
           +   P++DL  A  D+ A+P   L +    + R L + + G+ L IA SDP ++ A E  
Sbjct: 61  EYGTPLLDL--AEFDVSAIPEEFLNKKLIEKHRCLPLFKRGNRLYIATSDPTNIAALEEF 118

Query: 119 LNQLPDYGFEFVIAPEKQLVDGFDRYYRRTKEIVSFAEQLHAEHKTNDSFDFEITDSD-- 176
                 +  E ++  E +L    ++        +  +    A          E+TD+D  
Sbjct: 119 QFSAGLHA-EAILVEEDKLAKALEKVLEEDITGLDLSGMDEAALA-----GIEVTDTDKR 172

Query: 177 --------SDEVTVVKLINSLFEDAIQVGASDIHIEPDANVLRLRQRIDGVLHETLLHEV 228
                   SD+  +V  IN +  DAI+ GASD+H EP     R+R RIDG+LHE     +
Sbjct: 173 QEENAGEASDDAPIVIYINKILTDAIRKGASDLHFEPYEKRYRIRFRIDGILHEVSEPPI 232

Query: 229 NIASALVLRLKLMANLDISEKRLPQDGRFNIRV-KGQSVDIRMSTMPIQHGESVVMRLLN 287
           ++A  L  RLK+M+ LDI+E+R+PQDGR  +++ + +S+D R+ST+P   GE +VMR+L+
Sbjct: 233 SLAGRLSARLKVMSKLDIAERRVPQDGRIKMKLSRTKSIDFRVSTLPTLWGEKIVMRILD 292

Query: 288 QSAGVRKLEESGIPPHLLLRLRHQLKRPHGMILVTGPTGSGKTTTLYGALNELNTSGKKI 347
            S+    +E+ G  P         L +P GMILVTGPTGSGKT +LY  LN LNT+ + I
Sbjct: 293 SSSAQLGIEKLGYEPDQEKLYLEMLAKPQGMILVTGPTGSGKTVSLYTGLNILNTAERNI 352

Query: 348 ITAEDPVEYRISRINQVQVNPKINLDFSTLLRTFLRQDPDIILVGEMRDQETVEIGLRAA 407
            TAEDPVE  +  +NQV +N K  L F++ LR+FLRQDPD+++VGE+RD ET EI ++AA
Sbjct: 353 STAEDPVEINLEGVNQVHINLKAGLTFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAA 412

Query: 408 LTGHLVLSTLHTNDAVDSALRLIDMGAPGYLVASAVRAVVAQRLVRKVCPDCSGHDEVDE 467
            TGHLVLSTLHTN A ++  RLI+MG PGY +AS+V  ++AQRL R++C +C   +++ E
Sbjct: 413 QTGHLVLSTLHTNSAAETLTRLINMGVPGYNIASSVNLIIAQRLARRLCTECKQAEQIPE 472

Query: 468 ARRQWLVTRFPNQAAAKFTRGR--GCQNCNLTGYRGRIGVFEMLEL-DQPMMDCLRANDA 524
              Q L      Q A  FT  +  GC++C+  GY+GR+G++E++++ D+     +   ++
Sbjct: 473 HELQRLGFT-DEQIAQGFTTFKPVGCEHCS-GGYKGRVGIYEVMKMSDEIARTIMEGGNS 530

Query: 525 VAFSKAARSNTDYKPLLASAMELALQGIVSLDEV 558
           +  +  A++    + L  S +   LQG+ S+ E+
Sbjct: 531 LQIADQAKAQ-GMRDLRQSGLLKVLQGVTSIAEI 563