Pairwise Alignments

Query, 389 a.a., MSHA biogenesis protein MshN from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., TPR repeat protein from Marinobacter adhaerens HP15

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 87/385 (22%), Positives = 157/385 (40%), Gaps = 20/385 (5%)

Query: 7   MSVVNEALAKSAQRSHSRLSNIERIDVAKPKARPA---WLWVMLGFGVSLAVGGWSISLQ 63
           MS++N+AL  + QR +           ++   RP    W  V+L      A G    S+ 
Sbjct: 1   MSLLNDALRAAEQRQNRPEVAAAYAGQSQSLGRPRSVFWPVVLL-----FAAGLVGASVF 55

Query: 64  SVDTIPSSAEVVRPEVPSPTQKTTQQSIALYQAPVNSEALVKNETLVQKETLPKNETSVK 123
              T   S E+    + SP  KTT        A     ++        ++T+ +  + ++
Sbjct: 56  WFMTRTGSEEMPVEVIASPAPKTTMAPPIDQDAGTEKSSIDSQSVGGGQDTIEQVVSGIE 115

Query: 124 NAVLAKVEGSPT--SLKQTANRQREQT-ALGSELNAEPVLNLVDNSEPSFFEEEVS---- 176
           N  ++++  +P   ++ Q   + RE    + SE   EPV       E +  E  V+    
Sbjct: 116 NEPVSQLPPAPEPPAVVQPEPKAREAAETVVSEPTPEPVRRQASEPEGAVSEPVVAESKP 175

Query: 177 SLPSSSPVMIVEQVSLTPEQLAQKALQRAQKAMESNELQTAVSAYTEALRYTPHDEMARQ 236
           +  + +P   V+QV  TPE + ++  +     +   + + A     E L  T     +R+
Sbjct: 176 AQETEAPTPSVKQVRETPEAIDRRVSRELASLLRRGDTREAEQKLQE-LAATQAAIASRE 234

Query: 237 KLAALYYGKGDGRKAFDLMQAGIERNPDGEVLRLALAKLLVKEKQ--EASALVPLAYLPS 294
             A     +    +A   +   +     G  LRL  A+ L  + +  +A A + L+    
Sbjct: 235 VFARQMLVQEMPDRALAWLPESVTNGDAG--LRLLRARALHAKGRLPDAIAALELSVPAV 292

Query: 295 QPSIEYLSLRAALAQKTKQDEIARESYQQLTEKDPNNGRWWLGLAIQQERALQWPAAQHA 354
           + ++EY    A L Q+  ++  A   +  L  +D +   WW+GLAI  E   +  +A  A
Sbjct: 293 RQNVEYRVTLATLLQQAGRNTEAARHWSALIAEDDSRAAWWVGLAIALETGGEVNSAVRA 352

Query: 355 YQQALNKVGLSSQSQAFIHQRLQLL 379
           Y QA    GLS     ++ +RL+ L
Sbjct: 353 YSQAAQLPGLSPSLADYVRERLKSL 377