Pairwise Alignments

Query, 389 a.a., MSHA biogenesis protein MshN from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., MSHA biogenesis protein MshN, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  112 bits (280), Expect = 2e-29
 Identities = 88/322 (27%), Positives = 161/322 (50%), Gaps = 12/322 (3%)

Query: 67  TIPSSAEVV--RPEVPSPTQKTTQQSIALYQAPVNSEALVKNET-----LVQKETLPKNE 119
           +I ++ EVV  +P+  + TQ + +   ++ Q     +A ++  +     L ++ + P + 
Sbjct: 101 SIATTTEVVQTKPQQSTGTQASDKLDTSVAQPSPTDKATLEATSQSVPALAKESSAPVSA 160

Query: 120 TSVKNAVLAKVEGSPTS--LKQTANRQREQTALGSELNAEPVLNLVDNSEPSFFEEEVSS 177
            ++ +A +A+ + S T+  + +    Q E  A  S   A+           +  + E + 
Sbjct: 161 VNLPSANVAQAQASDTNRLIDRAKVHQTEPNATVSNQTAQVAPEPSQAKATANEQAEFTG 220

Query: 178 LPSSSP-VMIVEQVSLTPEQLAQKALQRAQKAMESNELQTAVSAYTEALRYTPHDEMARQ 236
           + S +   M V++V L+P QLAQK +  A  A +  +L  A+  Y +AL+  P    AR+
Sbjct: 221 VQSKAAGQMAVKEVKLSPSQLAQKQVALASDAEKQGQLLKAMGYYDKALKLDPSLHEARK 280

Query: 237 KLAALYYGKGDGRKAFDLMQAGIERNPDGEVLRLALAKLLVKEKQEASALVPLAYLPSQP 296
           +LAAL+YG+G+  +A +++  G    P      L LA++         AL  LA +P + 
Sbjct: 281 QLAALHYGQGELAQAAEVLSQGRLLYPQEYEFYLLLARIQHAMGDTDLALASLAQIPDRH 340

Query: 297 SI--EYLSLRAALAQKTKQDEIARESYQQLTEKDPNNGRWWLGLAIQQERALQWPAAQHA 354
            +  +    +  LAQK  Q  +  ++Y+QL +++P   + W+GLA   +    +  A  A
Sbjct: 341 VLARQKWLAQTDLAQKQGQFTLVEQAYRQLLQQEPQQAKLWMGLAYALDSQQHFAQASQA 400

Query: 355 YQQALNKVGLSSQSQAFIHQRL 376
           Y+ AL+  GLS+Q+ AFI QRL
Sbjct: 401 YRTALSYSGLSTQATAFIEQRL 422