Pairwise Alignments

Query, 281 a.a., MSHA biogenesis protein MshM from Vibrio cholerae E7946 ATCC 55056

Subject, 613 a.a., peptidoglycan binding domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  175 bits (443), Expect = 3e-48
 Identities = 109/256 (42%), Positives = 149/256 (58%), Gaps = 5/256 (1%)

Query: 1   MYLSHFGLEQLPFHLTPD-TELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMV 59
           MY + +GL+  PF + P+ T LFL    H EA+  L+  +    G   LTGEVGTGKT V
Sbjct: 1   MYKAFYGLKDNPFSIAPNPTYLFLS-DRHREALAHLTYGLGETGGFVLLTGEVGTGKTTV 59

Query: 60  CRMLLTHLGDEVALIYLPNPMLSGEELRQAVAAELQL---DVASPVRVVEQIQTRLIELH 116
            R LL  L D     ++ NP L+  EL   +  EL++   +  S  R+ + I   L++ H
Sbjct: 60  SRCLLRQLPDTTDTAFILNPALTELELLATLCDELKIPYGESPSLKRLTDLISGFLLKNH 119

Query: 117 QQGKRVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIGQPELDVRLAQHHLRQF 176
             G+  V ++DEAQ L  E LE LRL  NLET+  KLLQ++LIGQPEL   L +  LRQ 
Sbjct: 120 NAGRNTVLIIDEAQHLKAEVLEQLRLLTNLETDTKKLLQVILIGQPELQQLLKRQELRQL 179

Query: 177 RQRITFNANLRPLTQAETEVYIESRLQKAQAPYPLFNATLKKAVWRASQGIPRLINQICH 236
            QRIT   +L PLT  E  +Y++ RLQ A    PLFNA   KA+ +AS GIPR+IN +C 
Sbjct: 180 AQRITARYHLLPLTAEEVGLYVQHRLQVAGRFEPLFNAGAIKALHKASGGIPRIINLLCE 239

Query: 237 KALLLAWHEQSPLVNQ 252
           +AL+  + +    +N+
Sbjct: 240 RALMAGFAQSRVPINK 255