Pairwise Alignments

Query, 281 a.a., MSHA biogenesis protein MshM from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., MSHA biogenesis protein MshM (RefSeq) from Shewanella amazonensis SB2B

 Score =  253 bits (647), Expect = 3e-72
 Identities = 141/272 (51%), Positives = 179/272 (65%), Gaps = 4/272 (1%)

Query: 1   MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVC 60
           MYL HFGL ++PF LTP+T  F  LAPH EA+Q L  A++ GEG  K+TGEVGTGKT++ 
Sbjct: 1   MYLQHFGLREMPFALTPNTGFFFALAPHAEALQVLQTALQTGEGFIKVTGEVGTGKTLIL 60

Query: 61  RMLLTHLGDEVALIYLPNPMLSGEELRQAVAAELQLDVASPV---RVVEQIQTRLIELHQ 117
           R LL  L   +   YLPNP LS  ELR A+A EL L  ++ +   ++   IQ +L+ L  
Sbjct: 61  RKLLNDLPAPLRCAYLPNPCLSPNELRWALALELGLKYSANIDQQQLTSLIQHQLMALAA 120

Query: 118 QGKRVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIGQPELDVRLAQHHLRQFR 177
            G  VV ++DEAQAL  E+LETLRLF NLETE  KLLQ+VL GQPELD RLA   LRQ R
Sbjct: 121 HGHSVVLILDEAQALPQESLETLRLFTNLETESRKLLQVVLFGQPELDERLASPELRQLR 180

Query: 178 QRITFNANLRPLTQAETEVYIESRLQKA-QAPYPLFNATLKKAVWRASQGIPRLINQICH 236
           QRITF+  LRPL + E E Y++ RL+ A  +   LF++    A+ RAS+GIPRLIN + H
Sbjct: 181 QRITFSYRLRPLNRQEIEAYVQHRLKVAGLSDTGLFDSAAIAAIARASRGIPRLINILAH 240

Query: 237 KALLLAWHEQSPLVNQHHLFAAIHDTYDSCKP 268
           KAL+L + E    + +     AI DT D+ KP
Sbjct: 241 KALMLGFGEGLQRIGRRQALGAIRDTEDASKP 272