Pairwise Alignments

Query, 281 a.a., MSHA biogenesis protein MshM from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., ATPase (NCBI) from Rhodospirillum rubrum S1H

 Score =  130 bits (327), Expect = 4e-35
 Identities = 90/252 (35%), Positives = 127/252 (50%), Gaps = 6/252 (2%)

Query: 1   MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVC 60
           MYL  +GL   PF LTPD   F G   H  A   L   +  GEG   +TG+VG GKT + 
Sbjct: 1   MYLDFYGLHAHPFQLTPDPAFFFGANGHTRAKSYLMFGLSQGEGFVVVTGDVGAGKTTLL 60

Query: 61  RMLLTHLGD-EVALIYLPNPMLSGEELRQAVAAELQL-DVASPVR--VVEQIQTRLIELH 116
             +L  L D  + +  L    LS ++  + VA    L + A P +   +E I+  L ++ 
Sbjct: 61  SHMLRSLSDRSIRVARLSTTQLSADDTARVVARAFGLAEPAHPSKGAWLEAIEVFLTQVR 120

Query: 117 QQGKRVVALVDEAQALSDEALETLRLFGNLETEQ-TKLLQIVLIGQPELDVRLAQHHLRQ 175
             G+R V +VDE Q +   ALE LR+ GNL  +     LQ +L+GQP+    LA   L Q
Sbjct: 121 AAGERCVLIVDEVQNMGFAALEELRMLGNLGIDDGHSALQTILVGQPQFRNTLAGPSLDQ 180

Query: 176 FRQRITFNANLRPLTQAETEVYIESRL-QKAQAPYPLFNATLKKAVWRASQGIPRLINQI 234
            RQRI  + +L P+   E   Y+  RL Q      P F   +  AV+R S G+PR IN +
Sbjct: 181 LRQRIVASCHLGPIEPEEVGHYMRYRLTQAGWRGDPSFEEAVFPAVYRHSGGLPRRINIL 240

Query: 235 CHKALLLAWHEQ 246
           C + LL  + ++
Sbjct: 241 CSRLLLAGFLQE 252