Pairwise Alignments

Query, 281 a.a., MSHA biogenesis protein MshM from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., MSHA biogenesis protein MshM (NCBI) from Rhodospirillum rubrum S1H

 Score =  109 bits (272), Expect = 8e-29
 Identities = 87/284 (30%), Positives = 133/284 (46%), Gaps = 9/284 (3%)

Query: 3   LSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVCRM 62
           L HFG  + PF      EL          ++ L A +    G   + GE G GK+ +C  
Sbjct: 8   LVHFGFHRHPFPAEAGLELAYAGNDSQAPVRRLLARLTRYAGPVTVVGEAGLGKSYLCDW 67

Query: 63  LLTHLGDEVALIYLPNPMLSGEELRQAVAAELQLDVASPVRVVEQIQT-RLIELHQQGKR 121
           +   L     ++ +    L G  L   VA  L LD   P     ++ T RL+ L   G+R
Sbjct: 68  VAALLESRALVVRVNATDLGGARLLPLVAQALDLDPERPAGTSPRVLTARLLALRVSGRR 127

Query: 122 VVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIGQPELDVRLAQHHLRQFRQRIT 181
            V LVD A ALSD  LE LR    LET + +LL++ L G+P L  RL    L Q  +R+ 
Sbjct: 128 AVLLVDGADALSDGDLEDLRRLDALETARGRLLRVALFGRPGLRERL--QTLPQLARRLG 185

Query: 182 FNANLRPLTQAETEVYIESRLQKAQAPY---PLFNATLKKAVWRASQGIPRLINQICHKA 238
               L P+T+++   Y++ RL  ++ P    P+F    ++ + R ++G+P  ++++   A
Sbjct: 186 PGVRLTPMTRSDLTSYLDHRLAVSRDPLWIDPVFTPAARRRLLRLARGVPGDLDRLASAA 245

Query: 239 LLLAWHEQSPLVNQHHLFAAIHDTYDSCKPRFKT-PILWGWSKP 281
           L LA  E +  V   H+  A      +  PR+ T P L G+  P
Sbjct: 246 LYLAAGEGAATVETGHMGTAARAL--NLGPRWLTLPRLPGFGGP 287