Pairwise Alignments

Query, 281 a.a., MSHA biogenesis protein MshM from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., peptidoglycan binding domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  167 bits (423), Expect = 5e-46
 Identities = 100/246 (40%), Positives = 140/246 (56%), Gaps = 3/246 (1%)

Query: 1   MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVC 60
           MY + +GL   PF + P+         H EA+  L+  +    G   LTGEVGTGKT V 
Sbjct: 1   MYKAFYGLSDNPFSIAPNPHYLFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVS 60

Query: 61  RMLLTHLGDEVALIYLPNPMLSGEELRQAVAAELQLDVA-SPV--RVVEQIQTRLIELHQ 117
           R LL  L +     ++ NP L+  EL   +  EL +    SP   ++ +++   L+  H+
Sbjct: 61  RCLLNQLPENTDTAFILNPSLTELELLATLCDELGVHYGESPTLKQLTDKLSQFLLANHE 120

Query: 118 QGKRVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIGQPELDVRLAQHHLRQFR 177
           +G+  V ++DEAQ L  E LE LRL  NLET+  KLLQ++LIGQPEL   L +  LRQ  
Sbjct: 121 KGRNTVLIIDEAQHLRAEVLEQLRLLTNLETDTKKLLQVILIGQPELQQLLKRQELRQLA 180

Query: 178 QRITFNANLRPLTQAETEVYIESRLQKAQAPYPLFNATLKKAVWRASQGIPRLINQICHK 237
           QRIT   +L PLTQ E  +Y++ RLQ A    PLF+ +  K + + S GIPRLIN +C +
Sbjct: 181 QRITARYHLLPLTQQEIALYVQHRLQVAGRHEPLFHRSAIKTLHQYSGGIPRLINLLCER 240

Query: 238 ALLLAW 243
           AL+  +
Sbjct: 241 ALMAGY 246