Pairwise Alignments

Query, 281 a.a., MSHA biogenesis protein MshM from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., general secretion pathway protein, ATPase from Marinobacter adhaerens HP15

 Score =  217 bits (553), Expect = 2e-61
 Identities = 123/268 (45%), Positives = 167/268 (62%), Gaps = 8/268 (2%)

Query: 1   MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVC 60
           MY SHFGL++ PF LTP+T  FL    H +A++ L  A++  EG  K++GEVGTGKT++C
Sbjct: 1   MYESHFGLQEAPFALTPNTRYFLRAPSHGDALELLLVALKEREGFIKISGEVGTGKTLLC 60

Query: 61  RMLLTHLGDEVALIYLPNPMLSGEELRQAVAAELQLDV---ASPVRVVEQIQTRLIELHQ 117
           R+LL+ L       Y+PNP L+ + L +AVA EL +D+   A+  +V++ I  +LI    
Sbjct: 61  RLLLSELEPIAETAYIPNPQLTPDTLYEAVAEELGVDMSGCANAHQVLKAINEKLISHAM 120

Query: 118 QGKRVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIGQPELDVRLAQHHLRQFR 177
             K VV ++DEAQA+ +E +E LRL  NLETE  +LLQ+VL GQPELDV L +  LRQ  
Sbjct: 121 AQKPVVLVIDEAQAMPEETIEALRLLTNLETESVRLLQVVLFGQPELDVLLKKQSLRQLN 180

Query: 178 QRITFNANLRPLTQAETEVYIESRLQKAQAPY---PLFNATLKKAVWRASQGIPRLINQI 234
           QRITF+  L PL +     Y+  RL  AQA Y    LF     + + RAS GIPRL+N +
Sbjct: 181 QRITFHYRLTPLDRNSVAQYLRHRL--AQAGYNGADLFAPGALRLITRASGGIPRLVNIL 238

Query: 235 CHKALLLAWHEQSPLVNQHHLFAAIHDT 262
            HK++L AW     L+ + H   AI DT
Sbjct: 239 AHKSMLAAWGRGDRLIERGHAMQAIRDT 266