Pairwise Alignments

Query, 281 a.a., MSHA biogenesis protein MshM from Vibrio cholerae E7946 ATCC 55056

Subject, 568 a.a., peptidoglycan-binding domain 1 protein from Marinobacter adhaerens HP15

 Score =  167 bits (424), Expect = 4e-46
 Identities = 101/258 (39%), Positives = 144/258 (55%), Gaps = 3/258 (1%)

Query: 1   MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVC 60
           MY   FG  + PF + PD         H EA+  L   ++   G   +TGEVGTGKT V 
Sbjct: 1   MYYDFFGFREPPFSIAPDPRYLYLSDRHKEALAHLMYGVQGQGGFIVITGEVGTGKTTVS 60

Query: 61  RMLLTHLGDEVALIYLPNPMLSGEELRQAVAAELQL--DVASPVR-VVEQIQTRLIELHQ 117
           R  + ++ D V +  + NP LS  EL  ++  EL++  D+++ ++ +V+ I   L++ H 
Sbjct: 61  RCFIENVPDHVDIALILNPRLSARELLSSICDELEIPHDISATIKELVDLINRDLLKAHA 120

Query: 118 QGKRVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIGQPELDVRLAQHHLRQFR 177
            G+  V ++DEAQ LS E LE LRL  NLET + KLLQIVL+GQPEL   LA   LRQ  
Sbjct: 121 AGRHKVLMIDEAQNLSAEVLEQLRLLTNLETAEKKLLQIVLLGQPELQEMLALPELRQLN 180

Query: 178 QRITFNANLRPLTQAETEVYIESRLQKAQAPYPLFNATLKKAVWRASQGIPRLINQICHK 237
           QR+T   +L  + + E   Y++ RL  A     +F+      ++R SQGIPRLIN I  +
Sbjct: 181 QRVTARYHLDAIGRDELAAYLKYRLSVAGMRGDIFSQRAVNRLYRESQGIPRLINLISDR 240

Query: 238 ALLLAWHEQSPLVNQHHL 255
           ALL A+ E    +   H+
Sbjct: 241 ALLGAYAEGEHEITPEHI 258