Pairwise Alignments

Query, 281 a.a., MSHA biogenesis protein MshM from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., conserved domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  137 bits (346), Expect = 3e-37
 Identities = 88/246 (35%), Positives = 132/246 (53%), Gaps = 3/246 (1%)

Query: 1   MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVC 60
           MY + FG    PF L P+ +       + +A   L   +    G   +TGEVG GKT + 
Sbjct: 1   MYTAFFGFRVKPFDLLPNPDFLYPSRAYRKASAYLEYGVRDRAGFILITGEVGAGKTTLI 60

Query: 61  RMLLTHLGDEVALIYLPNPMLSGEELRQAVAAE--LQLDVASPVRVVEQIQTRLIELHQQ 118
           R LL     +V +  + N  +  E+L   +  +  L+ D    V ++  + T LIE + +
Sbjct: 61  RSLLKRSLGDVLISKVFNTSVDAEQLVAMINDDFGLETDGRDKVAMLRDLNTFLIEQYAE 120

Query: 119 GKRVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIGQPELDVRLAQHHLRQFRQ 178
            +R V ++DEAQ L+ E LE +R+  NLET+  KLLQI+L+GQPEL  R+    L Q RQ
Sbjct: 121 RRRPVLIIDEAQNLTPEVLEEVRMLSNLETDNAKLLQIILVGQPELRERIRSPQLLQLRQ 180

Query: 179 RITFNANLRPLTQAETEVYIESRLQKAQAPYPL-FNATLKKAVWRASQGIPRLINQICHK 237
           RI    +L PLT+ E E Y+  RL++A     L +   +   + RA++GIPRL+N +   
Sbjct: 181 RILVQCHLEPLTREEVEEYVLYRLERAGNRDALHWEEGVMAEMHRATRGIPRLVNILGSY 240

Query: 238 ALLLAW 243
            LL A+
Sbjct: 241 VLLDAY 246