Pairwise Alignments

Query, 281 a.a., MSHA biogenesis protein MshM from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., MSHA biogenesis protein MshM (RefSeq) from Shewanella sp. ANA-3

 Score =  254 bits (649), Expect = 2e-72
 Identities = 142/277 (51%), Positives = 179/277 (64%), Gaps = 4/277 (1%)

Query: 1   MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVC 60
           MYL HFGL Q PF LTP+T  F GL+P+ EA+Q L  A++ GEG  K+TGEVGTGKT++C
Sbjct: 1   MYLKHFGLSQTPFSLTPNTGFFFGLSPYVEALQVLQTALQTGEGFIKVTGEVGTGKTLIC 60

Query: 61  RMLLTHLGDEVALIYLPNPMLSGEELRQAVAAELQLDVASPV---RVVEQIQTRLIELHQ 117
           R L+  L       YLPNP L+  ELR AVA EL L   S +   ++   IQ +L+ L  
Sbjct: 61  RKLINELPQGFHCAYLPNPYLTPAELRWAVANELGLKYTSEIDQQQLTGLIQQQLLALSA 120

Query: 118 QGKRVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIGQPELDVRLAQHHLRQFR 177
            G  +V ++DEAQAL DE+LE LRLF NLETE  KLLQ+VL GQPELD RL +   RQ R
Sbjct: 121 HGHAIVLVLDEAQALPDESLEALRLFTNLETESRKLLQVVLFGQPELDERLKRQAFRQLR 180

Query: 178 QRITFNANLRPLTQAETEVYIESRLQKA-QAPYPLFNATLKKAVWRASQGIPRLINQICH 236
           QRITF+ +LRPLT  ET+ YI  RL  A  A   LF   L + +  AS+GIPRLIN + H
Sbjct: 181 QRITFSYSLRPLTWDETDAYIRYRLAVAGYAGQALFGPKLTRKIAEASRGIPRLINILAH 240

Query: 237 KALLLAWHEQSPLVNQHHLFAAIHDTYDSCKPRFKTP 273
           KAL+L++ E +  V   H+  AI DT D+ +   + P
Sbjct: 241 KALMLSFGEGATQVRMAHIKGAIQDTEDASRGSQRWP 277