Pairwise Alignments

Query, 281 a.a., MSHA biogenesis protein MshM from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., peptidoglycan binding domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  167 bits (423), Expect = 5e-46
 Identities = 103/258 (39%), Positives = 144/258 (55%), Gaps = 4/258 (1%)

Query: 1   MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVC 60
           MY + +GL   PF + P+         H EA+  L+  +    G   LTGEVGTGKT V 
Sbjct: 1   MYKAFYGLSDNPFSIAPNPHYLFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVS 60

Query: 61  RMLLTHLGDEVALIYLPNPMLSGEELRQAVAAELQLDVA-SPV--RVVEQIQTRLIELHQ 117
           R LL  L D     ++ NP L+  EL   +  EL++    +P   ++ + +   L+  H+
Sbjct: 61  RCLLGQLPDHTDTAFILNPSLTELELLATLCDELKISYGENPTLKQLTDHLSRFLLANHE 120

Query: 118 QGKRVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIGQPELDVRLAQHHLRQFR 177
           +G+  V ++DEAQ L  E LE LRL  NLET+  KLLQ++LIGQPEL + L +  LRQ  
Sbjct: 121 KGRNTVLIIDEAQHLRAEVLEQLRLLTNLETDTKKLLQVILIGQPELQLLLKRQELRQLA 180

Query: 178 QRITFNANLRPLTQAETEVYIESRLQKAQAPYPLFNATLKKAVWRASQGIPRLINQICHK 237
           QRIT   +L PL + E  +Y+  RLQ A    PLF     K + + S GIPRLIN +C +
Sbjct: 181 QRITARYHLLPLNEDEIALYVLHRLQVAGRFEPLFTRKAIKVLHKYSGGIPRLINLLCER 240

Query: 238 ALLLAWHEQSPLVNQHHL 255
           A L+A + QS +   HH+
Sbjct: 241 A-LMAGYAQSKVPIDHHM 257