Pairwise Alignments

Query, 559 a.a., pilus (MSHA type) biogenesis protein MshL from Vibrio cholerae E7946 ATCC 55056

Subject, 696 a.a., Type IV pilus biogenesis protein PilQ from Pseudomonas fluorescens FW300-N2E2

 Score = 98.2 bits (243), Expect = 9e-25
 Identities = 82/284 (28%), Positives = 131/284 (46%), Gaps = 32/284 (11%)

Query: 258 DEIRQVNEFLGISQQRMHRQVILEAKILEVTLSDGYQQGINWSKAFSSNGANYKIGSGSI 317
           DE+R++   L I      RQV++EA+I+E  +      G+ W  +  + G N+   SG  
Sbjct: 430 DELRRIVAQLDIPV----RQVMIEARIVEANVDYDKSLGVRWGGSIQNKG-NWS-SSGVT 483

Query: 318 TQDSN--GNP----ITSVLPGLDAIGNLLGGQSNVVISSGSFDAVISFMATQGDLNVLSS 371
           T DS   G P           L A GN  G     +  +   D  ++ M   G+  ++S 
Sbjct: 484 TGDSTTIGTPGSTSTNQPFVDLGASGNTSGIGIAFITDNVLLDLELTAMEKTGNGEIVSQ 543

Query: 372 PRVTASNNQKAVIKVGTDEYYVTDLSSVVGTGDNAQASPDITLTPFFSGISLDVTPQIDD 431
           P+V  S+ + A I  GT+  Y    SS   +    +AS           +SL+VTPQI  
Sbjct: 544 PKVVTSDKETAKILKGTEIPYQEASSSGATSVSFKEAS-----------LSLEVTPQITP 592

Query: 432 QGNVLLHVHPAVIEVEQQTKKILYRSEEIELPLARSSIRESDSVIRAKDGDVVVIGGLMK 491
              +++ V     E +       Y ++  ++P  + +  E ++ +   DG+ +VIGG+  
Sbjct: 593 DNRIIMEVKVTKDEPD-------YLNKVNDVPPIKKN--EVNAKVLVNDGETIVIGGVFS 643

Query: 492 SNTVDQVSKVPFLGDVPALGHLFRNTTKLTQKTELVILLKPTVV 535
           +     V KVPFLGDVP LG LFR       K+EL++ L P ++
Sbjct: 644 NTQSKVVDKVPFLGDVPYLGRLFRRDVVSDSKSELLVFLTPRIM 687