Pairwise Alignments

Query, 559 a.a., pilus (MSHA type) biogenesis protein MshL from Vibrio cholerae E7946 ATCC 55056

Subject, 644 a.a., general secretion pathway protein D from Pseudomonas stutzeri RCH2

 Score =  107 bits (267), Expect = 1e-27
 Identities = 80/267 (29%), Positives = 132/267 (49%), Gaps = 27/267 (10%)

Query: 277 QVILEAKILEVTLSDGYQQGINWSK--------AFSSNGANYKIGSGSITQDSNGNPITS 328
           QV++EA I+EV+       G+ W+         A   N  N  I  GS+    N N I  
Sbjct: 345 QVMVEAAIVEVSGDITDALGVQWAVDARGSRGGAGGVNFGNTGISVGSVLNAINENEIPD 404

Query: 329 VLPGLDAIGNLLGGQSNVVISSGSFDAVISFMATQGDLNVLSSPRVTASNNQKAVIKVGT 388
            LP    IG          I + SF A+I+ +++    N+LS+P +   +NQ+A I VG 
Sbjct: 405 NLPDGAIIG----------IGTRSFGALITALSSNSKSNLLSTPSLLTLDNQEAEILVGQ 454

Query: 389 DEYYVTDLSSVVGTGDNAQASPDITLTPFFSGISLDVTPQIDDQGNVLLHVHPAVIEVEQ 448
           +  + T   +    G N   +P  T+     G++L VTP I++   + L +   +  +  
Sbjct: 455 NVPFQTGSYTTDAAGAN---NPFTTIERQDIGVTLKVTPHINEGATLRLQIEQEISSIAP 511

Query: 449 QTKKILYRSEEIELPLARSSIRESDSVIRAKDGDVVVIGGLMKSNTVDQVSKVPFLGDVP 508
                   ++ ++L   + +I+   S I A+DG V+V+GGL++ +     +KVP LGD+P
Sbjct: 512 SAS---LTAQAVDLVTNKRAIK---STILAEDGQVIVLGGLIQDDVTRTNAKVPLLGDIP 565

Query: 509 ALGHLFRNTTKLTQKTELVILLKPTVV 535
            LG LFR+T +   K  L++ L+PTV+
Sbjct: 566 LLGALFRSTQETHIKRNLMVFLRPTVI 592