Pairwise Alignments

Query, 559 a.a., pilus (MSHA type) biogenesis protein MshL from Vibrio cholerae E7946 ATCC 55056

Subject, 718 a.a., type II and III secretion system protein:NolW-like protein:NolW-like protein from Pseudomonas syringae pv. syringae B728a

 Score =  112 bits (281), Expect = 4e-29
 Identities = 120/503 (23%), Positives = 207/503 (41%), Gaps = 77/503 (15%)

Query: 43  DQLPPSVEADLMPDMDTLTASEPK-TLQRFRIQAEDVEAKAFFASLVQGTEYSAAIHPAV 101
           ++L  SV      D+D   A +P  T ++  +  +D++ ++    +   T  +      V
Sbjct: 274 NKLTISVRPLTNEDLDRRAADKPVYTGEKLSLNFQDIDVRSVLQLIADFTNLNLVASDTV 333

Query: 102 TGRITLNLTDVTLDEALGVVRDLYGFEVVKEGKVIQVYPAGLRTVTIPVDYLQFKRTGR- 160
            G ITL L +V  D+AL +V    G +  K G V+ V          P D +  +     
Sbjct: 334 QGGITLRLQNVPWDQALDLVLKTKGLDKRKVGNVLLV---------APADEIAARERQEL 384

Query: 161 -SLTSITTGTITNTDTNNSNSSSSSSSSISSNSSSDGSSSNSNSNRSDARGGTEIET-TN 218
            SL  I        +    N + ++  +    S +   S      ++D RG   ++  TN
Sbjct: 385 ESLKQIAELAPLRRELLQVNYAKAADIAKLFQSVTSAES------KADERGSITVDDRTN 438

Query: 219 ESDFWPLLEKAVAQLLGGSGGQTVIVNPQAGVLTLRAYPDEIRQVNEFLGISQQRMHRQV 278
               +   E+                             DE+R++   L I      RQV
Sbjct: 439 NIIAYQTQERL----------------------------DELRRIVSQLDIPV----RQV 466

Query: 279 ILEAKILEVTLSDGYQQGINWSKAFSSNGAN----YKIGSGSITQDSNGNPITSVLPGLD 334
           ++EA+I+E  +    Q G+ W  + +++G+     Y + +      +    +T  +P +D
Sbjct: 467 MIEARIVEANVDYNKQLGVRWGGSTNTSGSGKWTTYGLDNNGDEAGNTSGNLTPNVPFVD 526

Query: 335 --AIGNLLGGQSNVVISSGSFDAVISFMATQGDLNVLSSPRVTASNNQKAVIKVGTDEYY 392
             A G   G     V ++   D  +S M   G+  ++S P+V  S+ + A I  GT+  Y
Sbjct: 527 LGAAGATSGIGLGFVTNNTLLDLELSAMEKTGNGEIVSQPKVVTSDKETAKILKGTEIPY 586

Query: 393 VTDLSSVVGTGDNAQASPDITLTPFFSGISLDVTPQIDDQGNVLLHVHPAVIEVEQQTKK 452
               SS   T    +AS           +SL+VTPQI     +++ V     E +     
Sbjct: 587 QESSSSGATTVSFKEAS-----------LSLEVTPQITPDNRIIMEVKVTKDEPD----- 630

Query: 453 ILYRSEEIELPLARSSIRESDSVIRAKDGDVVVIGGLMKSNTVDQVSKVPFLGDVPALGH 512
             Y +  + +P  + +  E ++ +   DG+ +VIGG+  +     V KVPFLGDVP LG 
Sbjct: 631 --YLNAVLGVPPIKKN--EVNAKVLISDGETIVIGGVFSNTQSKVVDKVPFLGDVPYLGR 686

Query: 513 LFRNTTKLTQKTELVILLKPTVV 535
           LFR       K+EL++ L P ++
Sbjct: 687 LFRRDVVSESKSELLVFLTPRIM 709