Pairwise Alignments

Query, 559 a.a., pilus (MSHA type) biogenesis protein MshL from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., MSHA biogenesis protein MshL (RefSeq) from Shewanella amazonensis SB2B

 Score =  526 bits (1354), Expect = e-153
 Identities = 283/557 (50%), Positives = 390/557 (70%), Gaps = 22/557 (3%)

Query: 13  LVGCSMGHR-DPVEAKQALNQAINETNSRQID--QLPPSVEADLMPDMDTLTASEPKTLQ 69
           L+ C    R +P  +K+AL + + + N++     +LP SV  +L         + P   +
Sbjct: 17  LIACQTTDRPNPQASKEALREVVAQQNAQAQPPAKLPDSVSRELAGSNTVFAPTLPPE-R 75

Query: 70  RFRIQAEDVEAKAFFASLVQGTEYSAAIHPAVTGRITLNLTDVTLDEALGVVRDLYGFEV 129
           RF + A  V+A+ FF SLV+GT +S A+HP V GRI+L+L  VTL EAL V+ DLYG+EV
Sbjct: 76  RFDVAANAVDARVFFPSLVKGTPFSVAVHPDVQGRISLSLKGVTLSEALQVIEDLYGYEV 135

Query: 130 VKEGKVIQVYPAGLRTVTIPVDYLQFKRTGRSLTSITTGTITNTDTNNSNSSSSSSSSIS 189
             EGKV++V+P+G+RT T PV+YL  +R G SLTS+T+G I++ + NN+N ++++ S+  
Sbjct: 136 SHEGKVLKVFPSGMRTETFPVNYLYMERMGVSLTSVTSGRISDNNNNNNNGNNNNGSN-G 194

Query: 190 SNSSSDGSSSNSNSNRSDARG----GTEIETTNESDFWPLLEKAVAQLLGG-SGGQTVIV 244
           +N+  +G ++N+  N ++  G    GT I++ N++DFW  L++ +  L+GG S  ++V+V
Sbjct: 195 NNAFDNGGANNNGVNGNNTNGNNTNGTFIQSRNKTDFWGELKETLESLIGGTSNNRSVVV 254

Query: 245 NPQAGVLTLRAYPDEIRQVNEFLGISQQRMHRQVILEAKILEVTLSDGYQQGINWSKAFS 304
            PQAG++T+RA P E+RQV EFL  ++  + RQVILEAK+LEVTLSDGYQQGI W+K   
Sbjct: 255 TPQAGLVTVRALPGELRQVREFLATAETHLQRQVILEAKVLEVTLSDGYQQGIQWNKIAG 314

Query: 305 SNGA--NYKIGSGSITQDSNGNPITSVLPGLDAIGNLLGGQSNVVISSGSFDAVISFMAT 362
           S  A  N KI   +   +  GN I+S L          GG +++ I    FDA+I+ + T
Sbjct: 315 SALADGNTKINFATSAGNEFGNQISSAL----------GGVTSLSIIGSDFDAMINLLDT 364

Query: 363 QGDLNVLSSPRVTASNNQKAVIKVGTDEYYVTDLSSVVGTGDNAQASPDITLTPFFSGIS 422
           QGD++VLSSPRVTASNNQKAVIKVG DEY+VTD+SS    G     SP++ LTPFFSGI+
Sbjct: 365 QGDVDVLSSPRVTASNNQKAVIKVGKDEYFVTDVSSTTVAGTTPVTSPEVELTPFFSGIA 424

Query: 423 LDVTPQIDDQGNVLLHVHPAVIEVEQQTKKILYRSEEIELPLARSSIRESDSVIRAKDGD 482
           LDVTPQID QGNVLLHVHP+VI+V++QTK I   + ++ELPLA+S IRESD+VI+A  GD
Sbjct: 425 LDVTPQIDGQGNVLLHVHPSVIDVKEQTKTIKISNSDLELPLAQSEIRESDTVIKAMSGD 484

Query: 483 VVVIGGLMKSNTVDQVSKVPFLGDVPALGHLFRNTTKLTQKTELVILLKPTVVGVNTWQK 542
           VVVIGGLMKS +++ VSKVP LGD+P LG  F N ++  +KTELVILLKPTVV   TWQK
Sbjct: 485 VVVIGGLMKSESLELVSKVPLLGDIPFLGEAFTNRSQSVRKTELVILLKPTVVVSGTWQK 544

Query: 543 ELERSRSLLQEWFPDSQ 559
           ELERS++LL  W+P+ +
Sbjct: 545 ELERSKALLDRWYPEGE 561