Pairwise Alignments

Query, 559 a.a., pilus (MSHA type) biogenesis protein MshL from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., MSHA-type pilus biogenesis protein MshL from Dechlorosoma suillum PS

 Score =  170 bits (431), Expect = 1e-46
 Identities = 146/561 (26%), Positives = 231/561 (41%), Gaps = 84/561 (14%)

Query: 41  QIDQLPPSVEADLMPDMDTLTASEPKTLQR---FRIQAEDVEAKAFFASLVQGTEYSAAI 97
           Q D  P    A   P M T    +P+   R   + +   +V+ +    +L +  + +  I
Sbjct: 51  QADSAPVVSGAIPAPVMQTAALPKPRIAPRTETYSVVVNNVKVQELLFALARDAKLNVDI 110

Query: 98  HPAVTGRITLNLTDVTLDEALGVVRDLYGFEVVKEGKVIQVYPAGLRTVTIPVDYLQFKR 157
           HP ++G +TLN  D TL + L  +          +G  + V P         +DY+   R
Sbjct: 111 HPGISGTVTLNAIDQTLPQILNRLAKQVDMRFELDGPNLAVMPDTPYLRNYKIDYVNMTR 170

Query: 158 TGRSLTSITT-------GTITNTDTNNSNSSSSSSSSIS--SNSSSDGSSSNSNSNRSDA 208
                 S+TT       G  T   T    ++ S +SS++   N +      N   N  D 
Sbjct: 171 DTAGTVSVTTQIATAGAGASTTGTTTVPGTAGSGNSSVTRIENKAQHHFWDNLIQNIKDI 230

Query: 209 RGGTEIETTNESDFWPLLEKAVAQLLGGSG------------------------------ 238
              T+ +   E     + E A  Q   G+G                              
Sbjct: 231 LRETD-KVMPEGSSETVTEVAATQTTTGTGTPPAAGSRTSAPATSLAGSANPATLQNSGA 289

Query: 239 ----------GQTVIVNPQAGVLTLRAYPDEIRQVNEFLGISQQRMHRQVILEAKILEVT 288
                       +V+ +P+ G++T+RA   +  ++ E++        RQV++EA I EV 
Sbjct: 290 MVVRRTTFREAASVMAHPETGIVTVRATSRQHEKIQEYVDQVMGSARRQVLIEATIAEVR 349

Query: 289 LSDGYQQGINWSKAFSSNGANYKIGSGSITQDSNGNPITSVLPGLDAIGNLLGGQSNVVI 348
           L   YQQGINWS+               IT  + G  +T  L G  A+  ++   SN  I
Sbjct: 350 LDQNYQQGINWSR---------------ITGGAAGFTLTQTLGG--AVAGIIASGSNFEI 392

Query: 349 ------SSGSFDAVISFMATQGDLNVLSSPRVTASNNQKAVIKVGTDEYYVTDLSSVVGT 402
                 S G F + +  + T G + VLSSP+++  NNQ AVIKV  +  Y T  +     
Sbjct: 393 GYKNSTSGGGFTSALRLLETFGTVKVLSSPKISVLNNQTAVIKVVDNHVYFTIKADTSQN 452

Query: 403 GDNAQASPDITLTPFFSGISLDVTPQIDDQGNVLLHVHPAVIEVEQQT--------KKIL 454
             N   +   TL     G  ++VT QI     VLL++ P++  V  +         K I 
Sbjct: 453 QVNTVTTYTTTLNSVPVGFVMNVTAQISGDDTVLLNIRPSISRVVDEIPDPNPALKKGIN 512

Query: 455 YRSEEIELPLARSSIRESDSVIRAKDGDVVVIGGLMKSNTVDQVSKVPFLGDVPALGHLF 514
             ++ IE  +     RE +SV+R ++G++ V+GGLM+    ++   VP L  +P  G LF
Sbjct: 513 GLADSIESKVPVIRTREMESVLRVENGNIAVMGGLMEEMLQNRADSVPGLSRLPVAGGLF 572

Query: 515 RNTTKLTQKTELVILLKPTVV 535
                  QKTELVI L+P ++
Sbjct: 573 SAKDDSLQKTELVIFLRPVII 593