Pairwise Alignments

Query, 559 a.a., pilus (MSHA type) biogenesis protein MshL from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., MSHA-type pilus biogenesis protein MshL from Dechlorosoma suillum PS

 Score =  359 bits (922), Expect = e-103
 Identities = 202/522 (38%), Positives = 314/522 (60%), Gaps = 22/522 (4%)

Query: 48  SVEADLMPDMDTLTASEPKTLQRFRIQAEDVEAKAFFASLVQGTEYSAAIHPAVTGRITL 107
           +V   L+P +       P    RF +   +  A   F +LV GT YS  + P V G IT+
Sbjct: 49  AVNQALLPPLQLDVPKAPPAEPRFDLAVTNAPASQVFMALVSGTRYSMLVPPEVAGSITV 108

Query: 108 NLTDVTLDEALGVVRDLYGFEVVKEGKVIQVYPAGLRTVTIPVDYLQFKRTGRSLTSITT 167
           NL +VTL EAL  +RDLYG++   +G  I V    ++T    V+YL  +R G S   +T+
Sbjct: 109 NLKNVTLREALESLRDLYGYDFRVQGNRITVMSNAMQTRVFQVNYLAGRRQGSSDVRVTS 168

Query: 168 GTITNTDTNNSNSSSSSSSSISSNSSSDGSSSNSNSNRSDARGGTEIETTNESDFWPLLE 227
            +I+      S+S SS+SS+ +  +++ G++  + +  + A+  + + T+ ++DFW  L+
Sbjct: 169 SSISVVSPGASSSGSSTSSAQAQAATASGTTG-AGAGATRAQDSSRVYTSQDADFWTELK 227

Query: 228 KAVAQLLGGSGGQTVIVNPQAGVLTLRAYPDEIRQVNEFLGISQQRMHRQVILEAKILEV 287
            A+  ++G   G++VI+N  +GV+ +RA P E+R V ++L  +Q  + RQV+LEAKI++V
Sbjct: 228 TALGAIVGTEDGRSVIINSHSGVILVRAMPGELRNVEQYLRATQAIIERQVMLEAKIIDV 287

Query: 288 TLSDGYQQGINWSK-------AFSSNGANYKIGSGSITQDSNGNPITSVLPGLDAIGNL- 339
            LSD YQ GINW+          ++NG +    SG++T D+      S+ PG D  GNL 
Sbjct: 288 ALSDAYQSGINWASFSGHTTIGVAANGTSLS-PSGALTSDN-----ASIRPGTD--GNLG 339

Query: 340 ---LGGQSNVVISSGSFDAVISFMATQGDLNVLSSPRVTASNNQKAVIKVGTDEYYVTDL 396
                G   +   + SF A+++F+ TQG+  VLSSPR+   NNQKAV+KVGTDEYYVT++
Sbjct: 340 SVGTNGFFGLAFRTKSFAALLNFLETQGNTQVLSSPRIATLNNQKAVLKVGTDEYYVTNV 399

Query: 397 SSVVGTGDNAQASPDITLTPFFSGISLDVTPQIDDQGNVLLHVHPAVIEVEQQTKKILYR 456
           SS          +P +TL PFFSGI+LDVTPQI++ G + LH+HP++  V ++ K +   
Sbjct: 400 SSTTIASTTTTTTPTVTLQPFFSGIALDVTPQINESGLITLHIHPSISVVTEKNKSLSLG 459

Query: 457 SE-EIELPLARSSIRESDSVIRAKDGDVVVIGGLMKSNTVDQVSKVPFLGDVPALGHLFR 515
           ++  + LPLA S I ESD+++R +DG++V IGGLM  +  D  + +P +  VP LG+LF 
Sbjct: 460 TDLAMTLPLATSRINESDTIVRVRDGEIVAIGGLMTQDQSDTSNGLPGIHQVPVLGNLFG 519

Query: 516 NTTKLTQKTELVILLKPTVV-GVNTWQKELERSRSLLQEWFP 556
             +K   K ELVILLKPTV+   + WQ +L+ ++S + ++ P
Sbjct: 520 QKSKALNKRELVILLKPTVIQNESDWQSDLQNTQSRIDDFDP 561