Pairwise Alignments

Query, 559 a.a., pilus (MSHA type) biogenesis protein MshL from Vibrio cholerae E7946 ATCC 55056

Subject, 809 a.a., general secretion pathway protein GspD from Cupriavidus basilensis FW507-4G11

 Score =  109 bits (273), Expect = 4e-28
 Identities = 103/396 (26%), Positives = 173/396 (43%), Gaps = 58/396 (14%)

Query: 158 TGRSLTSITTGTITNTDTNNSN--SSSSSSSSISSNSSSDGSSSNSNSNRSDARGGTEIE 215
           TG +  +  TG + NT T N+   +  S+ SS S + S  GSS+ +NS  ++      + 
Sbjct: 340 TGAAGVAGGTGLL-NTSTPNTGQYTGGSTGSSRSGSGSGGGSSAFANSFATNT-----LP 393

Query: 216 TTNESDFWPLLEKAVAQLLGGSGGQTVIVNPQAGVLTLRAYPDEIRQVNEFLGISQQRMH 275
           TT                     G  +  +P    L + A     R +   +     R  
Sbjct: 394 TT---------------------GGIIQADPATNSLIITASEPVYRNLRAVIEDLDAR-R 431

Query: 276 RQVILEAKILEVTLSDGYQQGINWSKAFSSNGANYKIGSGS----------------ITQ 319
            QV +E+ I+EV+ +   Q GI W    +S  +N  + +G+                   
Sbjct: 432 AQVYIESMIVEVSSTQTGQLGIQWQGLLNSRNSNTNVFAGTNFGTGGQNIINLTGAAAAI 491

Query: 320 DSNGNPITSVLPGLDAIGNLLGGQSNVVISSGSFDAVISFMATQGDLNVLSSPRVTASNN 379
           ++NG+     + GL  + +L G    +V  +    A++  +   G +N+LS+P +    N
Sbjct: 492 NANGSAAIPSVSGL--VPDLAGLNLGIVNRAMGLGALLHALGADGSVNLLSTPNLITLEN 549

Query: 380 QKAVIKVGTDEYYVTDLSSVVGTGDNAQASPDITLTPFFSGISLDVTPQIDDQGNVLLHV 439
           ++A I +G +    T   S   TG +A  +P  T      GI+L V PQI D G V + +
Sbjct: 550 EEAKILIGQNIPVTT--GSYAQTGSSASVTPFQTFDRKDVGITLRVKPQITDGGLVKMQI 607

Query: 440 HPAVIEVEQQTKKILYRSEEIELPLARSSIRESDSVIRAKDGDVVVIGGLMKSNTVDQVS 499
           +     V Q T  +             +++R  ++ +   DG ++V+GGL++    D V 
Sbjct: 608 YQESSSVVQGTAALTQGPT--------TNVRSIETNVLVDDGQIIVLGGLIEDTYGDGVQ 659

Query: 500 KVPFLGDVPALGHLFRNTTKLTQKTELVILLKPTVV 535
           KVP LGD+P +G LFR   K   KT L++ L+P V+
Sbjct: 660 KVPGLGDLPWIGGLFRYENKNRGKTNLLVFLRPYVM 695