Pairwise Alignments

Query, 559 a.a., pilus (MSHA type) biogenesis protein MshL from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., pilus (MSHA type) biogenesis protein MshL (RefSeq) from Shewanella sp. ANA-3

 Score =  521 bits (1342), Expect = e-152
 Identities = 279/559 (49%), Positives = 392/559 (70%), Gaps = 24/559 (4%)

Query: 13  LVGCSMGHR-DPVEAKQALN---QAINETNSRQIDQLPPSVEADLMPDMDTLTASEP-KT 67
           L+ C    R  PV +K+AL    Q  ++        +P +V+ +L  +      + P +T
Sbjct: 15  LMACQTTDRPQPVASKEALATSMQTASQPTPPPPATMPDAVQRELNANAMMGGLTPPMET 74

Query: 68  LQRFRIQAEDVEAKAFFASLVQGTEYSAAIHPAVTGRITLNLTDVTLDEALGVVRDLYGF 127
            +R  + A DV+A+ FF SLVQGT +S A+HP V G I+L+L  VTL EA+ VV D+YG+
Sbjct: 75  ERRIDVSAHDVDARVFFPSLVQGTPFSVAVHPDVQGTISLSLKGVTLSEAIQVVEDIYGY 134

Query: 128 EVVKEGKVIQVYPAGLRTVTIPVDYLQFKRTGRSLTSITTGTIT---NTDTNNSNSSSSS 184
           EV +EG++++V+PAG+RT T P++YL  +R G SLTS+++G I+   N++ NNSN+++S+
Sbjct: 135 EVSREGRILRVFPAGMRTETFPLNYLYMERDGLSLTSVSSGRISDNNNSNNNNSNNNNSN 194

Query: 185 SSSISSNSSSDGSSSNS--NSNRSDARGGTEIETTNESDFWPLLEKAVAQLLGGSGG-QT 241
           + +  +NS+++ S++ +  N+N SD+  GT I +  ++DFW  L++ ++ ++G +GG + 
Sbjct: 195 NGNFGNNSNNNNSNNGNYGNNNNSDSTNGTFIRSRTKTDFWGELKETLSAIIGDTGGGRQ 254

Query: 242 VIVNPQAGVLTLRAYPDEIRQVNEFLGISQQRMHRQVILEAKILEVTLSDGYQQGINWSK 301
           V+V PQAG++T+RAYP+E+RQV  FL  ++  + RQVILEAKILEVTLSDGYQQGI W  
Sbjct: 255 VVVTPQAGLVTIRAYPNELRQVRAFLNSAESHLQRQVILEAKILEVTLSDGYQQGIQWDN 314

Query: 302 AFSSNGANYKIGSGSITQDSNGNPITSVLPGL-DAIGNLLGGQSNVVISSGSFDAVISFM 360
                G            ++N N  TS   GL D I   LGG +++ I    F+ +IS +
Sbjct: 315 VLGHVG------------NTNINFGTSAGAGLSDKITASLGGVTSLSIKGSDFNTMISLL 362

Query: 361 ATQGDLNVLSSPRVTASNNQKAVIKVGTDEYYVTDLSSVVGTGDNAQASPDITLTPFFSG 420
            TQGD++VLSSPRVTASNNQKAVIKVGTDEY+VTD+SS    G     +P + LTPFFSG
Sbjct: 363 DTQGDVDVLSSPRVTASNNQKAVIKVGTDEYFVTDVSSTTVAGTTPVTTPQVELTPFFSG 422

Query: 421 ISLDVTPQIDDQGNVLLHVHPAVIEVEQQTKKILYRSEEIELPLARSSIRESDSVIRAKD 480
           I+LDVTPQID  GNVLLHVHP+VI+V++QTK I   SE +ELPLA+S IRESD+VIRA  
Sbjct: 423 IALDVTPQIDKDGNVLLHVHPSVIDVKEQTKDIKVSSESLELPLAQSEIRESDTVIRAAS 482

Query: 481 GDVVVIGGLMKSNTVDQVSKVPFLGDVPALGHLFRNTTKLTQKTELVILLKPTVVGVNTW 540
           GDVVVIGGLMKS   + VS+VP LGD+P +G LF+N +K  +KTEL+I+LKPTVVG +TW
Sbjct: 483 GDVVVIGGLMKSENTEVVSQVPLLGDIPLVGELFKNRSKQKKKTELIIMLKPTVVGGDTW 542

Query: 541 QKELERSRSLLQEWFPDSQ 559
           + ELERS++LL  W+P+++
Sbjct: 543 RNELERSKTLLDRWYPENK 561