Pairwise Alignments

Query, 216 a.a., MSHA biogenesis protein MshJ from Vibrio cholerae E7946 ATCC 55056

Subject, 217 a.a., MSHA biogenesis protein MshJ (RefSeq) from Shewanella amazonensis SB2B

 Score = 98.2 bits (243), Expect = 1e-25
 Identities = 57/212 (26%), Positives = 111/212 (52%), Gaps = 1/212 (0%)

Query: 3   SGWQNFESRFSALSQREKVLITLCGSVLIVMMLLLGLIEPALKQGQARQLQMQTLTSSNL 62
           S + +  +++ AL+ RE+ +I       ++M+L + +     +   A Q   QT  ++++
Sbjct: 2   SRFDSLATKYDALTLRERGIIFFAALFGLLMLLSMPVESLWKEYRLASQTLSQTRATNHI 61

Query: 63  QLQGEIMALQAQLAKNPDQELDVELSQLTLQSQEISELLAAKMTSMVAPSEMPNLLESVL 122
             Q ++   Q +LA++P ++     + L  + Q++ + L  +   MV    MP +L  +L
Sbjct: 62  SEQ-QLALYQERLAQDPHRDFLQRKALLEKEHQQLDKALEEQTLDMVPARLMPTVLARML 120

Query: 123 KQGQQLKLVSLESLPAEPIVRATESRSESEYYIHPVRMELTGSYFAIRDYLQALEALPVK 182
              + L L   ES+   P++   E   +   Y H + + L G +FA++ +++A+E L  K
Sbjct: 121 DGAKGLTLTGFESIAPVPLIEVGEGEQKLNLYSHGMALTLEGDFFAVQRFVEAVEGLENK 180

Query: 183 YYWRHFHYRVESYPQARVILEVYTLGSREEFI 214
            YW+   YRV++YP+A V L ++TL   E+FI
Sbjct: 181 LYWKRMDYRVKAYPKAEVQLMLHTLSVNEDFI 212