Pairwise Alignments

Query, 216 a.a., MSHA biogenesis protein MshJ from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., MSHA biogenesis protein MshJ (RefSeq) from Shewanella loihica PV-4

 Score =  132 bits (331), Expect = 6e-36
 Identities = 78/214 (36%), Positives = 121/214 (56%), Gaps = 2/214 (0%)

Query: 1   MKSGWQNFESRFSALSQREKVLITLCGSVLIVMMLLLGLIEPALKQGQARQLQMQTLTSS 60
           MK     +   F  LSQRE+++IT+   V+I M+L L L E  L Q    Q  ++ LT+ 
Sbjct: 1   MKQQIVRWGEAFDQLSQRERIMITVAVVVVIGMLLYLPL-ESLLTQSSRVQSNIKALTAE 59

Query: 61  NLQLQGEIMALQAQLAKNPDQELDVELSQLTLQSQEISELLAAKMTSMVAPSEMPNLLES 120
           N   + +I   Q  LA +PDQE    L+ L  Q++++ + L+ +M  MV   +MP +L  
Sbjct: 60  NRISEQQIDLYQQTLASDPDQEYRQRLAGLQQQAKDLDQQLSFQMVDMVPADKMPTMLGE 119

Query: 121 VLKQGQQLKLVSLESLPAEPIVRATESRSESEYYIHPVRMELTGSYFAIRDYLQALEALP 180
           +L + Q ++L S ESL  +P++ A    ++   Y H +++   G YFA   +++A+EA+P
Sbjct: 120 LLGRVQGIRLQSFESLAPKPLL-ALGDENKLNLYSHGIKLAFEGDYFATLKFIEAVEAMP 178

Query: 181 VKYYWRHFHYRVESYPQARVILEVYTLGSREEFI 214
            K YWR   Y V  YP+A V LEVYTL   ++FI
Sbjct: 179 NKLYWRQLDYVVGDYPKAEVTLEVYTLSINKDFI 212