Pairwise Alignments

Query, 216 a.a., MSHA biogenesis protein MshJ from Vibrio cholerae E7946 ATCC 55056

Subject, 216 a.a., MSHA biogenesis protein MshJ (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  127 bits (319), Expect = 2e-34
 Identities = 74/214 (34%), Positives = 118/214 (55%), Gaps = 2/214 (0%)

Query: 1   MKSGWQNFESRFSALSQREKVLITLCGSVLIVMMLLLGLIEPALKQGQARQLQMQTLTSS 60
           MK+ +     +F ALSQRE+ LI L   VL+ M+  +  IE   KQ  +   Q++ L   
Sbjct: 1   MKAQFNQLAQKFDALSQRERGLIALAVLVLLGMLAYMP-IESLWKQQHSTTQQLEALEQE 59

Query: 61  NLQLQGEIMALQAQLAKNPDQELDVELSQLTLQSQEISELLAAKMTSMVAPSEMPNLLES 120
           N     +I   Q +LA +P+Q+    L+ L  Q+Q+I   L  +M  MV    MP LL +
Sbjct: 60  NSVSLQQIDLYQQRLAMDPNQDYRQRLNLLQQQNQQIDAQLNEQMVDMVPADYMPELLGN 119

Query: 121 VLKQGQQLKLVSLESLPAEPIVRATESRSESEYYIHPVRMELTGSYFAIRDYLQALEALP 180
           +L Q Q +KL+   S+   P++ A     +   Y H +RM L G YF++  +++A+EA+P
Sbjct: 120 LLGQVQGIKLLKFTSIAPVPLL-AVGDEKKLNLYSHGIRMSLEGDYFSVLRFVEAVEAMP 178

Query: 181 VKYYWRHFHYRVESYPQARVILEVYTLGSREEFI 214
            K YW+   Y+V  YP+ ++ +E+YTL   ++FI
Sbjct: 179 DKLYWKRLDYKVADYPKGKIDIELYTLSINKDFI 212