Pairwise Alignments

Query, 479 a.a., MSHA biogenesis protein MshI from Vibrio cholerae E7946 ATCC 55056

Subject, 201 a.a., fimbrial assembly family protein (RefSeq) from Shewanella loihica PV-4

 Score = 71.2 bits (173), Expect = 3e-17
 Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 8/201 (3%)

Query: 283 PQETINFYQDHLKPKREKFTLTNLLLAWLALSVVLL----LGYAGVGYQNWVIQQQWQEQ 338
           P+  +N +   L P R + +   LL     L V+LL    L Y  +G     ++    + 
Sbjct: 3   PKLRVNLFTASLLPPRLRLSFRRLLQLGFGLFVLLLAANLLAYLHLGS----LEADKHQL 58

Query: 339 QQHNQSLTEQAAHLRQQVAVHLPSPAKQAAIGRIKQEISSKQQALDAIGQFDVAQQTGYS 398
                +  +Q A L Q +A    S A    +  + Q++  K+  L  +   +     GYS
Sbjct: 59  LSDKAAFDQQKAQLEQAIAKRSASQALVQQVDLLSQQVELKRLLLGELSHVETLTSKGYS 118

Query: 399 GVLNSLAQLARSDISLSSITLDSSQLNVQGLARDPAAIPNWISQFKQELHLMGRSFEQLK 458
            +L  LA++    + LS I +   Q   +G +  P A+P W+++ +    L G++F  L 
Sbjct: 119 PLLTGLARVTDDQLWLSRIQVQEDQFVFEGFSAAPNAVPLWLARLQGVEPLKGQTFSTLT 178

Query: 459 IGRNDQDMITFELNTQRGEQR 479
           + R ++  + F L ++R E++
Sbjct: 179 MNRGEKQPLGFVLRSKRDEEQ 199