Pairwise Alignments

Query, 479 a.a., MSHA biogenesis protein MshI from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., hypothetical biogenesis protein MshI (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)

Query: 44  LQQQSWQAVLVQTLQKHAVHDVQIHLVLHSQLYQTYQIEQPSIPREEWSAALPFLLKDML 103
           LQQ  WQ+   +         +QI  VL S  YQ    ++P++  +E S AL + +KDM+
Sbjct: 49  LQQDQWQSAFTELASAFPHSALQI--VLGSGRYQLLVADKPNVDSQELSQALIWSIKDMV 106

Query: 104 SEKVTDVVAD--AHPLPGSGKVQAYVISKRTILELQSMAVSAGLT-LGRVIPEQAIWGLV 160
           +  V  +  D    PLP S K+   V+ K  +  +       GLT LG  I E A+  L 
Sbjct: 107 TIPVPQIHLDYFESPLP-SNKLNVVVVDKDKLTNMVQAINEQGLTILGISIEELAMTNLF 165

Query: 161 GGELSHFLLLHRSMGGSFKLDAFVDRQCSFQRTLRGITA---PVTDNAASALQLDSLALE 217
             +    L++    G    L      Q   QR +RG +       D     L  D+L+LE
Sbjct: 166 MDDNQARLVVSHHPGQELLLTVVKQGQLYMQRRVRGFSQLDKAEVDELNYGLA-DNLSLE 224

Query: 218 LQRSIDYLSAQLKGGSLQQLKVCCDG 243
           +QRS+DY  +QL+   +  +++  DG
Sbjct: 225 IQRSMDYFESQLRQSPVNSIELFADG 250