Pairwise Alignments

Query, 177 a.a., ssDNA-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., single-strand binding protein (RefSeq) from Shewanella loihica PV-4

 Score =  187 bits (475), Expect = 1e-52
 Identities = 112/225 (49%), Positives = 137/225 (60%), Gaps = 53/225 (23%)

Query: 1   MASRGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTEWHRVTL 60
           MASRGVNKVIL+GNLG+DPEVRYMP+G AVAN T+ATSE+W+D+  G+ +E+TEWH + +
Sbjct: 1   MASRGVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQ-QGQMQERTEWHNIVM 59

Query: 61  YGKLAEVAGEYLRKGSQVYIEGQLQTRKWQD-QSGQDRYSTEVVVQGYNGIMQMLGGRAQ 119
           Y +LAE+AGEYL+KGS+VY+EG+LQT KWQD Q+GQDRY TE+ V      MQML  R Q
Sbjct: 60  YRRLAEIAGEYLKKGSKVYLEGKLQTSKWQDQQTGQDRYKTEINVNE----MQMLDSRGQ 115

Query: 120 -QGGMPAQGGMNVPAQ-----------------------QGSWGQPQQPAKQHQ------ 149
            QGG   Q G   P Q                       QG +G  QQ A Q Q      
Sbjct: 116 GQGGQGGQQGYGAPQQQNQYAPQQSAPAARPQQPQHSAPQGGYGAQQQAAPQQQGYGAQP 175

Query: 150 -------PMQQSAPQQYS-------QPQYN-EPPMD--FDDDIPF 177
                  P  Q+APQQ +       QPQ N  P +D  +DDDIPF
Sbjct: 176 QQAPAYAPKPQAAPQQQAPQQRPAPQPQQNFTPDLDDGWDDDIPF 220