Pairwise Alignments

Query, 214 a.a., helix-turn-helix transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 216 a.a., transcriptional regulator CsgD from Rahnella sp. WP5

 Score = 88.2 bits (217), Expect = 1e-22
 Identities = 49/132 (37%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 82  ILFNVEKRLRTEDLLTFGNLKGLFYANEDTGFIAHGLGEIINGQNWLPRHVSSQLLHYYR 141
           +L N        ++ T+  +  +FY + D   +  G+  +I G+ +  +  +S L++   
Sbjct: 85  LLLNTPDNYHFREIETWPGISAVFYLSTDEEHLVEGIRSVIRGECYFSQGFASYLINQSG 144

Query: 142 YAFQSHQVQATVDLTAREIQILRCLQTGASNMQIAENLFISEFTVKSHLYQIFKKLNVKN 201
            AF+ H       LT RE +IL  L+ GASN +IA  LFISE TVK+HLY +F+K++VKN
Sbjct: 145 -AFR-HLHSEETGLTHREKEILNKLRVGASNTEIARLLFISENTVKTHLYNLFRKISVKN 202

Query: 202 RVKAIAWVNQNL 213
           R +A +W N NL
Sbjct: 203 RTQAASWANDNL 214