Pairwise Alignments

Query, 214 a.a., helix-turn-helix transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., transcriptional regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 73.6 bits (179), Expect = 3e-18
 Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 12/180 (6%)

Query: 38  IEPERLLREYQSDKHKILLLDHAENGLIR----QQLGPLKLTSPYFETILFNVEKRLRTE 93
           + P+ +  + + ++  ++++D +   L +    Q+L  L    P    +     K +   
Sbjct: 35  VSPDEMCDQIKDNQASMVVIDLSTVDLQKAYQFQRL--LARQHPSVRVVYIQFPKLVDAR 92

Query: 94  DLLTFGNLKGLFYANEDTGFIAHGLGEIINGQNWLPRHVSSQLLHYYRYAFQSHQVQATV 153
            L+      G+FY +     I+ GL  I+ G   +P     QL++     F  ++   T 
Sbjct: 93  FLMQAPTTAGVFYLDAGLTEISLGLSNILRGHRVIP----IQLVNGVNDDFGLYE--DTE 146

Query: 154 DLTAREIQILRCLQTGASNMQIAENLFISEFTVKSHLYQIFKKLNVKNRVKAIAWVNQNL 213
            LT RE ++L+ L +G++N+ IA  LF+SE T+K+HLY++F+K+ V +R +AIAW    L
Sbjct: 147 PLTIREREVLQALLSGSTNLDIANQLFVSESTIKTHLYRVFRKIGVSSRGQAIAWAQTYL 206