Pairwise Alignments

Query, 940 a.a., UvrABC system protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 961 a.a., Excinuclease ABC subunit A from Pseudomonas syringae pv. syringae B728a

 Score = 1444 bits (3737), Expect = 0.0
 Identities = 700/940 (74%), Positives = 829/940 (88%), Gaps = 2/940 (0%)

Query: 1   MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           +DKI +RGARTHNLKNI+LT+PRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 18  VDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 77

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC 120
           ARQFLS+MEKPDVD IEGLSPAISIEQKSTSHNPRSTVGTITE+YDYLRLLYARVG+PRC
Sbjct: 78  ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQPRC 137

Query: 121 PEHQVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARID 180
           P+H +PL+AQT+SQMVD VL  PEGSK+MLLA +++ERKGEH+   E L AQGF+RAR++
Sbjct: 138 PDHDIPLEAQTVSQMVDLVLSQPEGSKLMLLAPVIRERKGEHLSVFEELRAQGFVRARVN 197

Query: 181 GETCDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVVAPMEGD 240
           G+ C+L + PKL+  KKH+I+V+VDRFKVR+DLQQRLAESFETAL+L+ GI +VAPM+ +
Sbjct: 198 GKLCELDELPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE 257

Query: 241 -GEEQIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDANL 299
            GEE IFSA FACP CG+++ ELEP+LFSFNNPAGACPTCDGLGV+Q+FD  R++ +A L
Sbjct: 258 PGEEVIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLV-NAEL 316

Query: 300 SLAQGAIRGWDQKNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIEFKY 359
           +LA+GAIRGWD++N YYFQML +L++HY F +  PF ++   +Q+I+L+GSG   ++F+Y
Sbjct: 317 TLAEGAIRGWDRRNVYYFQMLGSLSKHYGFSLEMPFKQIPADMQKILLNGSGSQSVDFRY 376

Query: 360 INDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGTRLKIEARN 419
           +NDRGDI  + HPFEGI+ NLERRYR+TES +VREELAK++  +PC  C GTRL+ EAR+
Sbjct: 377 LNDRGDIVKRAHPFEGIVPNLERRYRETESATVREELAKFLGTQPCPDCRGTRLRREARH 436

Query: 420 VFINDTALPTIVELSIADALTFFQELKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNL 479
           V++ +  LP +  L I DA  +F+ LKL G+R +IA+K++KEI +RLQFLVNVGL+YL L
Sbjct: 437 VWVGEKTLPAVTSLPIGDATHYFETLKLTGRRGEIADKILKEIRERLQFLVNVGLDYLTL 496

Query: 480 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRNLGNT 539
            RSA+TLSGGEAQRIRLASQIGAGLVGVMY+LDEPSIGLHQRDN+RLL TL HLR++GNT
Sbjct: 497 DRSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLGTLKHLRDIGNT 556

Query: 540 VLVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVKKIAV 599
           V+VVEHDEDAIR+AD+V+DIGPGAGVHGG +VAEG  +E++++P+SLTG+YLSG  KIAV
Sbjct: 557 VIVVEHDEDAIRLADYVVDIGPGAGVHGGHIVAEGTPDEVMSHPDSLTGKYLSGRVKIAV 616

Query: 600 PEQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHT 659
           P +RTP++ K ++ LKGA GNNL+NV+L IP+GL TCVTGVSGSGKSTLIN+T F ++ T
Sbjct: 617 PAKRTPRNKKLSLTLKGARGNNLQNVNLDIPIGLLTCVTGVSGSGKSTLINNTLFPLSAT 676

Query: 660 ALNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQE 719
           ALNGATT   A + SI GL+H DKV+DIDQSPIGRTPRSNPATYTG+FTPIRELFAG  E
Sbjct: 677 ALNGATTLEAATHDSINGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPE 736

Query: 720 SRSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRY 779
           SRSRGY PGRFSFNV+GGRCEACQGDG+IKVEMHFLPD+YVPCDVCK KRYNRETLEV+Y
Sbjct: 737 SRSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEVKY 796

Query: 780 KGKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL 839
           KGK I EVL+MT+E+AREFFD VP +ARKLQTLMDVGLSYI+LGQSATTLSGGEAQRVKL
Sbjct: 797 KGKNIHEVLEMTIEEAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKL 856

Query: 840 ARELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVIKTADW 899
           +RELSKRDTGKTLYILDEPTTGLHF DIQQLL VLHRLRDHGNTVVVIEHNLDVIKTADW
Sbjct: 857 SRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADW 916

Query: 900 IIDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLL 939
           ++DLGPEGG  GG IIA GTPE VA++E S+T  +LKPLL
Sbjct: 917 LVDLGPEGGSRGGQIIATGTPEQVAEMEQSYTGHYLKPLL 956