Pairwise Alignments
Query, 940 a.a., UvrABC system protein A from Vibrio cholerae E7946 ATCC 55056
Subject, 973 a.a., excinuclease ABC subunit A from Sinorhizobium meliloti 1021
Score = 1108 bits (2867), Expect = 0.0
Identities = 574/958 (59%), Positives = 715/958 (74%), Gaps = 25/958 (2%)
Query: 4 IEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63
I +RGAR HNLK I+L +PR+KLIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ
Sbjct: 7 ISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 66
Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPEH 123
FL +M+KPDVD I+GLSPAISIEQK+TS NPRSTVGT+TE+YDYLRLL+ARVG P P
Sbjct: 67 FLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYLRLLFARVGVPYSPAT 126
Query: 124 QVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARIDGET 183
+P+++QT+SQMVD+VLE EG+++ +LA +V+ RKGE+ K L L +GF R ++DG+
Sbjct: 127 GLPIESQTVSQMVDRVLEFGEGTRLYMLAPLVRGRKGEYRKELAELMKKGFQRVKVDGQF 186
Query: 184 CDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVV-------VAP 236
++ D P L+ KH I+V+VDR VR D+ RLA+S ET L L+ G+ + + P
Sbjct: 187 YEIADVPALDKKYKHDIDVVVDRVVVRPDIGTRLADSIETCLTLADGLAIAEFADRPLPP 246
Query: 237 MEGDG------------EEQIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGV 284
E E +FS FACP G+++ E+EPRLFSFNNP GAC TCDGLG
Sbjct: 247 EETSAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACTTCDGLGS 306
Query: 285 QQYFDPDRVIQDANLSLAQGAIRGWDQKNF-YYFQMLTALAEHYDFDVHTPFNKLSKKIQ 343
QQ D ++ + N +L GAI W + YY Q L AL + F + + +++LS++ Q
Sbjct: 307 QQKIDEALIVPEPNRTLRDGAIAPWAKSTSPYYNQTLEALGTVFGFKLGSRWSELSEEAQ 366
Query: 344 EIILHGSGRTEIEFKYINDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNK 403
E ILHG+ + +I F Y + K FEGI+ NLERR+++T+S REE+ +Y+S
Sbjct: 367 EAILHGT-KDKITFHYQDGARSYNTTK-TFEGIVPNLERRWKETDSAWAREEIERYMSAA 424
Query: 404 PCSSCDGTRLKIEARNVFINDTALPTIVELSIADALTFFQELK--LEGQRAQIAEKVMKE 461
PC +C G RLK EA V I+ + + E+SI A +F+ L L ++ +IA +++KE
Sbjct: 425 PCPACAGYRLKPEALAVKIHALHIGEVSEMSIRAARDWFEVLPEHLSTKQNEIAVRILKE 484
Query: 462 INDRLQFLVNVGLNYLNLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 521
I +RL+FL +VGL YL+LSR++ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQR
Sbjct: 485 IRERLRFLNDVGLEYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQR 544
Query: 522 DNERLLQTLTHLRNLGNTVLVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIA 581
DN RLL TL HLR++GNTV+VVEHDEDAI AD+V+DIGP AG+HGG V+AEG +I++
Sbjct: 545 DNARLLDTLRHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGEVIAEGTPSDIMS 604
Query: 582 NPNSLTGQYLSGVKKIAVPEQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVS 641
NP SLTG+YLSG +AVP +R KK V + GA NNLKNV SIP+G+FT VTGVS
Sbjct: 605 NPKSLTGKYLSGELSVAVPGERRKPKKKKEVTVVGARANNLKNVTASIPLGVFTAVTGVS 664
Query: 642 GSGKSTLINDTFFKIAHTALNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPA 701
G GKST + +T +K A + GA PA + I G EH DKVIDIDQSPIGRTPRSNPA
Sbjct: 665 GGGKSTFLIETLYKAAARRVMGARE-NPAEHDRIDGFEHIDKVIDIDQSPIGRTPRSNPA 723
Query: 702 TYTGIFTPIRELFAGTQESRSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVP 761
TYTG FTPIR+ FAG E+++RGYQPGRFSFNV+GGRCEACQGDGVIK+EMHFLPDVYV
Sbjct: 724 TYTGAFTPIRDWFAGLPEAKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVT 783
Query: 762 CDVCKGKRYNRETLEVRYKGKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIR 821
CDVC GKRYNRETL+V +KGK+I +VLDMTVE+ EFF VP + KL TL VGL YI+
Sbjct: 784 CDVCHGKRYNRETLDVHFKGKSIADVLDMTVEEGVEFFAAVPAVRDKLVTLNQVGLGYIK 843
Query: 822 LGQSATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHG 881
+GQ A TLSGGEAQRVKLA+ELSKR TG+TLYILDEPTTGLHFHD+ +LL VLH L + G
Sbjct: 844 IGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVAKLLEVLHELVNQG 903
Query: 882 NTVVVIEHNLDVIKTADWIIDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLL 939
N+VVVIEHNL+VIKTADWIID GPEGG GGG +IA+GTPE+V + S+T +FLK LL
Sbjct: 904 NSVVVIEHNLEVIKTADWIIDFGPEGGDGGGEVIAQGTPEEVVKEPRSYTGQFLKELL 961
Score = 62.8 bits (151), Expect = 1e-13
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 3 KIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62
++ V GAR +NLKN+ +IP +TG+SG GKS+ +TLY RR + + A
Sbjct: 634 EVTVVGARANNLKNVTASIPLGVFTAVTGVSGGGKSTFLIETLYKAAARRVMGARENPA- 692
Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPE 122
E +D E + I I+Q PRS T T + +R +A + E +
Sbjct: 693 ------EHDRIDGFEHIDKVIDIDQSPIGRTPRSNPATYTGAFTPIRDWFAGLPEAKARG 746
Query: 123 HQ 124
+Q
Sbjct: 747 YQ 748
Score = 60.8 bits (146), Expect = 4e-13
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 610 KTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHTALNGATTATP 669
KT+ ++GA +NLK +DL +P +TG+SGSGKS+L DT + + +A
Sbjct: 5 KTISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYA 64
Query: 670 APYRSIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGIFTPIRELFA 715
+ + D++ I I+Q R PRS T T I+ +R LFA
Sbjct: 65 RQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYLRLLFA 116