Pairwise Alignments

Query, 940 a.a., UvrABC system protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 942 a.a., excinuclease ABC, A subunit (RefSeq) from Shewanella amazonensis SB2B

 Score = 1551 bits (4016), Expect = 0.0
 Identities = 763/940 (81%), Positives = 847/940 (90%), Gaps = 1/940 (0%)

Query: 1   MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MDKIE+RGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDKIEIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC 120
           ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLL+ARVGEPRC
Sbjct: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLFARVGEPRC 120

Query: 121 PEHQVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARID 180
           P H  PL AQT+SQMVDKVLE PEG K+MLLA +VK RKGEHVK L++L+AQG+IRARID
Sbjct: 121 PTHGQPLAAQTVSQMVDKVLERPEGEKLMLLAPVVKARKGEHVKLLDSLSAQGYIRARID 180

Query: 181 GETCDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVVAPME-G 239
           GE CDL+DPP L+LH KHTIEV+VDRFKV+ D+QQRLAESFET LELSGGI VVA ME G
Sbjct: 181 GEVCDLSDPPTLDLHVKHTIEVVVDRFKVKDDMQQRLAESFETTLELSGGIAVVASMEEG 240

Query: 240 DGEEQIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDANL 299
             EE IFSANFACPHCGYSM ELEPR+FSFNNPAGAC TCDGLGVQQ+FDP+RVI    L
Sbjct: 241 AAEEMIFSANFACPHCGYSMAELEPRIFSFNNPAGACQTCDGLGVQQFFDPERVIVSGEL 300

Query: 300 SLAQGAIRGWDQKNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIEFKY 359
           SLA GA+RGWD++NFYYFQML +LAEHY+FDV  PF++L+ K+Q+I+L+GSG+ E+ F+Y
Sbjct: 301 SLAGGAVRGWDRRNFYYFQMLKSLAEHYEFDVEAPFSELTAKVQKIVLYGSGKEEVAFRY 360

Query: 360 INDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGTRLKIEARN 419
           +NDRGD+ ++KHPFEGIL+N++RRYR+TESN+VREELAKYISN+ CSSC G+RL+ EAR+
Sbjct: 361 VNDRGDVVVRKHPFEGILNNMDRRYRETESNTVREELAKYISNQACSSCGGSRLREEARH 420

Query: 420 VFINDTALPTIVELSIADALTFFQELKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNL 479
           VFI D  LPT+   SI +A+ +F +L+ EGQ+AQIAEK++KE+ DRL FLVNVGLNYL+L
Sbjct: 421 VFIEDLNLPTLTHWSIGEAMDYFNKLEFEGQKAQIAEKILKEVRDRLGFLVNVGLNYLSL 480

Query: 480 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRNLGNT 539
           +RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL TLTHLR+LGNT
Sbjct: 481 ARSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLTHLRDLGNT 540

Query: 540 VLVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVKKIAV 599
           V+VVEHDEDAIRMADH+IDIGPGAGVHGG V+ +G++  I A  +S+TGQY+SG +KI V
Sbjct: 541 VIVVEHDEDAIRMADHIIDIGPGAGVHGGEVICDGDLAAITACEHSVTGQYISGKRKIQV 600

Query: 600 PEQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHT 659
              RTP + ++ +EL+GA GNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAH 
Sbjct: 601 DGGRTPINPEQLIELRGARGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHK 660

Query: 660 ALNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQE 719
           ALNGAT   PAPY SI GLE  DKV+DIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQE
Sbjct: 661 ALNGATVDEPAPYTSITGLEQCDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQE 720

Query: 720 SRSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRY 779
           SR+RGYQ GRFSFNV+GGRCEACQGDG+IKVEMHFLPDVYVPCD CKGKRYNRETLEV+Y
Sbjct: 721 SRTRGYQVGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDSCKGKRYNRETLEVKY 780

Query: 780 KGKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL 839
           KGK I EVL MTVEDAR FFD VP IARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL
Sbjct: 781 KGKNIHEVLQMTVEDARTFFDAVPAIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL 840

Query: 840 ARELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVIKTADW 899
           A+ELSKRDTGKTLYILDEPTTGLHF DIQ LL VLHRL+ HGNT+VVIEHNLDVIKTADW
Sbjct: 841 AKELSKRDTGKTLYILDEPTTGLHFADIQLLLDVLHRLKSHGNTIVVIEHNLDVIKTADW 900

Query: 900 IIDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLL 939
           I+DLGPEGG GGG I+  GTPEDVA+   SHTARFLKPLL
Sbjct: 901 IVDLGPEGGSGGGTILVAGTPEDVAEHPTSHTARFLKPLL 940