Pairwise Alignments

Query, 940 a.a., UvrABC system protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 951 a.a., excinuclease ABC subunit UvrA from Rahnella sp. WP5

 Score = 1557 bits (4032), Expect = 0.0
 Identities = 759/940 (80%), Positives = 847/940 (90%), Gaps = 1/940 (0%)

Query: 1   MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MDKIEVRGARTHNLKNINL IPRDKLIV+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDKIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC 120
           ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITE++DYLRLL+ARVGEPRC
Sbjct: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120

Query: 121 PEHQVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARID 180
           P+H +PL AQT+SQMVD VL  PEG ++MLLATI+K+RKGEH KTLENLA+QG+IRARID
Sbjct: 121 PDHNIPLSAQTVSQMVDNVLAQPEGQRLMLLATIIKDRKGEHTKTLENLASQGYIRARID 180

Query: 181 GETCDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVVAPMEGD 240
           GE CDL+DPPKLEL KKHTIEV+VDRFKVR DL QRLAESFETALELSGG  VVA M+  
Sbjct: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLAQRLAESFETALELSGGTAVVADMDDP 240

Query: 241 -GEEQIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDANL 299
             EE +FSANFACP CGYSMRELEPR+FSFNNPAGACPTCDGLGVQQ+FDPDRV+Q+  L
Sbjct: 241 KAEEMLFSANFACPVCGYSMRELEPRMFSFNNPAGACPTCDGLGVQQFFDPDRVVQNPEL 300

Query: 300 SLAQGAIRGWDQKNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIEFKY 359
           SLA GAIRGWD++NFYYFQML +L EHYDFDV  PFN+LS  +Q  ILHGSG+T IEFKY
Sbjct: 301 SLAGGAIRGWDRRNFYYFQMLRSLGEHYDFDVEAPFNELSSDVQNAILHGSGKTTIEFKY 360

Query: 360 INDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGTRLKIEARN 419
           INDRGD  +++HPFEG+LHN+ERRY++TES++VREEL+KYISN+PC+SC GTRL+ EARN
Sbjct: 361 INDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELSKYISNRPCTSCRGTRLREEARN 420

Query: 420 VFINDTALPTIVELSIADALTFFQELKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNL 479
           VF+ +T LP I + SI  A+ FF+ +KL GQRA+IAEKV+KEI DRL+FLVNVGLNYL+L
Sbjct: 421 VFVEETTLPEISDFSIGHAMDFFRNMKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLSL 480

Query: 480 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRNLGNT 539
           SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL+TL HLR+LGNT
Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRDLGNT 540

Query: 540 VLVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVKKIAV 599
           V+VVEHDEDAIR ADH+IDIGPGAGVHGG VVAEG  E+I+A  NSLTGQ+LSG ++I+V
Sbjct: 541 VIVVEHDEDAIRAADHIIDIGPGAGVHGGEVVAEGTAEDIMATENSLTGQFLSGKREISV 600

Query: 600 PEQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHT 659
           P QR P DA K ++L GA GNNLK+V L++PVGLFTC+TGVSGSGKSTLINDT F +A  
Sbjct: 601 PAQRVPADATKVLKLSGAKGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPLAQR 660

Query: 660 ALNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQE 719
            LNGAT A  APYR I+GL HFDKVIDIDQSPIGRTPRSNPATYTGIFTP+RELFAG  E
Sbjct: 661 ELNGATIAEAAPYREIEGLGHFDKVIDIDQSPIGRTPRSNPATYTGIFTPVRELFAGVPE 720

Query: 720 SRSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRY 779
           SRSRGY PGRFSFNV+GGRCEACQGDGVIKVEMHFLPD+YVPCD CKGKRYNRETLE++Y
Sbjct: 721 SRSRGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780

Query: 780 KGKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL 839
           KGK+I EVL+MT+E+AR+FFD VP +ARKLQTL+DVGL+YI LGQSATTLSGGEAQRVKL
Sbjct: 781 KGKSIHEVLEMTIEEARDFFDAVPALARKLQTLIDVGLTYISLGQSATTLSGGEAQRVKL 840

Query: 840 ARELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVIKTADW 899
           ARELSKR TG+TLYILDEPTTGLHF DIQQLL VLH+LRD GNT+VVIEHNLDVIKTADW
Sbjct: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEHNLDVIKTADW 900

Query: 900 IIDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLL 939
           I+DLGPEGG GGG I+  GTPE VA+ + SHTARFLKPLL
Sbjct: 901 IVDLGPEGGAGGGQILVAGTPETVAECKESHTARFLKPLL 940