Pairwise Alignments

Query, 940 a.a., UvrABC system protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 966 a.a., uvrABC system protein A from Phaeobacter inhibens DSM 17395

 Score = 1159 bits (2999), Expect = 0.0
 Identities = 588/959 (61%), Positives = 735/959 (76%), Gaps = 22/959 (2%)

Query: 1   MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           +  IEVRGAR HNLKNI++ IPRD+L+VITGLSGSGKSSLAFDT+YAEGQRRYVESLSAY
Sbjct: 4   LKSIEVRGAREHNLKNIDVDIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 63

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC 120
           ARQFL +MEKPDVDHI GLSPAISIEQK+TS NPRSTVGT+TE+YDYLRLL+AR G P  
Sbjct: 64  ARQFLDMMEKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARAGTPYS 123

Query: 121 PEHQVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARID 180
           P   +P++AQ +  MVD+++ L EG++  LLA IV++RKGE+ K    L  QGF R ++D
Sbjct: 124 PATGMPIEAQQVQDMVDRIMTLEEGTRGFLLAPIVRDRKGEYRKEFLELRKQGFQRVKVD 183

Query: 181 GETCDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVV--APME 238
           GE  +L +PP L+   +H I+V+VDR  VR  ++ RLA+S  TAL+L+ GI ++  AP  
Sbjct: 184 GEFYELDEPPTLDKKFRHDIDVVVDRLVVREGVETRLADSLRTALDLADGIAILETAPRA 243

Query: 239 GDGEEQ------IFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDR 292
            +GEE        FS NFACP  G+++ E+EPRLFSFN P GACP CDGLGV+ +FD   
Sbjct: 244 AEGEEAPEPERITFSENFACPVSGFTIPEIEPRLFSFNAPFGACPECDGLGVELFFDERL 303

Query: 293 VIQDANLSLAQGAIRGWDQ-KNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSG 351
           V+ D NL +  GA+  W + K+ Y+ Q + A+A+HY F+ +T +  L  K+Q++ L GSG
Sbjct: 304 VVPDQNLKIYDGALAPWRKGKSPYFLQTIEAIAKHYQFNKNTKWKDLPNKVQQVFLRGSG 363

Query: 352 RTEIEFKYINDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGT 411
             EI+F+Y ++ G +   +  FEG++ N+ERRYR+T+SN +REE  +Y +N+ C  C+G 
Sbjct: 364 DEEIKFRY-DEGGRVYEVERVFEGVIPNMERRYRETDSNWIREEFERYQNNRSCGVCEGY 422

Query: 412 RLKIEARNVFINDTA--------LPTIVELSIADALTFFQEL--KLEGQRAQIAEKVMKE 461
           RL+ EA  V I  T         +  +V++SI +AL + +++  +L  Q+ +IA  ++KE
Sbjct: 423 RLREEALAVKIGPTGGRPDQLLHVGQVVQMSIREALAWIEDVPNQLSPQKQEIARAIVKE 482

Query: 462 INDRLQFLVNVGLNYLNLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 521
           I +RL FL NVGL YL LSR+A TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQR
Sbjct: 483 IRERLGFLNNVGLEYLTLSRNAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQR 542

Query: 522 DNERLLQTLTHLRNLGNTVLVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIA 581
           DN+RLL+TL +LR+ GNTV+VVEHDEDAIR AD+V DIGPGAGVHGG VV+ G  E + A
Sbjct: 543 DNDRLLETLKNLRDQGNTVIVVEHDEDAIREADYVFDIGPGAGVHGGQVVSHGTPEMVAA 602

Query: 582 NPNSLTGQYLSGVKKIAVPEQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVS 641
           +  S+TGQYLSG ++IAVP  R  K   K+V++  A GNNLKNV    P+G F CV+GVS
Sbjct: 603 DEGSITGQYLSGTREIAVPSVRR-KGNGKSVKVVKATGNNLKNVTAEFPLGKFLCVSGVS 661

Query: 642 GSGKSTLINDTFFKIAHTALNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPA 701
           G GKSTL  +T FK A   LNGA   TPAP  +I+GLEH DKVIDIDQ PIGRTPRSNPA
Sbjct: 662 GGGKSTLTIETLFKTASMRLNGARQ-TPAPCETIKGLEHLDKVIDIDQRPIGRTPRSNPA 720

Query: 702 TYTGIFTPIRELFAGTQESRSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVP 761
           TYTG FTPIRE FAG  ES++RGY+PGRFSFNV+GGRCEACQGDGVIK+EMHFLPDVYV 
Sbjct: 721 TYTGAFTPIREWFAGLPESKTRGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVE 780

Query: 762 CDVCKGKRYNRETLEVRYKGKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIR 821
           C+ CKG RYNRETLE+++KGK+I +VLDMTVEDA++FF  VP I  K+  LM VGL YI+
Sbjct: 781 CETCKGARYNRETLEIQFKGKSIADVLDMTVEDAQQFFQAVPSIRDKMDALMRVGLGYIK 840

Query: 822 LGQSATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHG 881
           +GQ ATTLSGGEAQRVKL++EL+KR TG+TLYILDEPTTGLHF D+++LL VLH L + G
Sbjct: 841 VGQQATTLSGGEAQRVKLSKELAKRSTGRTLYILDEPTTGLHFEDVRKLLEVLHELVEQG 900

Query: 882 NTVVVIEHNLDVIKTADWIIDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLLN 940
           N+VVVIEHNLDVIKTADWIID+GPEGG GGG I+A GTPEDVA  + SHT  +LK +L+
Sbjct: 901 NSVVVIEHNLDVIKTADWIIDIGPEGGDGGGEIVAAGTPEDVAAAKGSHTGHYLKEILD 959