Pairwise Alignments

Query, 940 a.a., UvrABC system protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 945 a.a., excinuclease ABC subunit UvrA from Pseudomonas aeruginosa PA14

 Score = 1464 bits (3790), Expect = 0.0
 Identities = 713/941 (75%), Positives = 828/941 (87%), Gaps = 3/941 (0%)

Query: 1   MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MDKI +RGARTHNLKN++LT+PRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDKILIRGARTHNLKNVDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC 120
           ARQFLS+MEKPDVD IEGLSPAISIEQKSTSHNPRSTVGTITE+YDYLRLLYARVG PRC
Sbjct: 61  ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRC 120

Query: 121 PEHQVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARID 180
           P+H +PL+AQT+SQMVD+VL LPEGSK+MLLA +++ERKGEH+   + + AQGF+RAR+D
Sbjct: 121 PDHDIPLEAQTVSQMVDQVLALPEGSKLMLLAPVIRERKGEHLAVFDEMRAQGFVRARVD 180

Query: 181 GETCDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVVAPMEGD 240
           G+  +L + PKL+  KKH+I+V+VDRFKVR+DLQQRLAESFETAL L+ GI +VAPM+ D
Sbjct: 181 GKLYELDEVPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALSLADGIALVAPMDED 240

Query: 241 G--EEQIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDAN 298
              EE IFSA FACP CG+S+ ELEP+LFSFNNPAGACPTCDGLGV+Q+FD  RV+ +  
Sbjct: 241 EDVEEIIFSARFACPVCGHSISELEPKLFSFNNPAGACPTCDGLGVKQFFDARRVV-NGE 299

Query: 299 LSLAQGAIRGWDQKNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIEFK 358
           L+LA+GAIRGWD++N YYFQML +LA+HY F +  PF++L  + Q+++L+GSGR  ++F+
Sbjct: 300 LTLAEGAIRGWDRRNVYYFQMLGSLAQHYGFSLEEPFDELGAEHQKVVLYGSGRENVDFR 359

Query: 359 YINDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGTRLKIEAR 418
           Y+NDRGDI  + HPFEGIL NLERRYR+TES +VREELAK++S +PC  C GTRL+ EAR
Sbjct: 360 YLNDRGDIVKRSHPFEGILPNLERRYRETESATVREELAKFLSTQPCPDCHGTRLRREAR 419

Query: 419 NVFINDTALPTIVELSIADALTFFQELKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLN 478
           +V++ D  LP I  + + +A  +   L L G+R +IA K++KEI DRLQFLVNVGL+YL 
Sbjct: 420 HVWVGDRTLPAITAMPVGEACEYAAGLSLTGRRGEIAAKILKEIRDRLQFLVNVGLDYLT 479

Query: 479 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRNLGN 538
           L RSA+TLSGGEAQRIRLASQIGAGLVGVMY+LDEPSIGLHQRDNERLL TLTHLRNLGN
Sbjct: 480 LDRSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLGTLTHLRNLGN 539

Query: 539 TVLVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVKKIA 598
           TV+VVEHDEDAIR+AD+V+DIGPGAGVHGG VVAEG  ++++ +P+SLTG+YLSG KKIA
Sbjct: 540 TVIVVEHDEDAIRLADYVVDIGPGAGVHGGQVVAEGTPDQVMNHPDSLTGKYLSGRKKIA 599

Query: 599 VPEQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAH 658
           VP +RTP+D KK ++LKGA GNNL+NV+L IPVGLFTC+TGVSGSGKSTLIN+T F I  
Sbjct: 600 VPAKRTPRDKKKLLKLKGARGNNLQNVNLEIPVGLFTCITGVSGSGKSTLINNTLFPITA 659

Query: 659 TALNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQ 718
           TALNGATT   APY S  GL+H DKV+DIDQSPIGRTPRSNPATYTG+FTPIRELF+G  
Sbjct: 660 TALNGATTLEVAPYDSFDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFSGVP 719

Query: 719 ESRSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVR 778
           E+RSRGY PGRFSFNV+GGRCEACQGDGVIKVEMHFLPD+YVPCDVCKGKRYNRETLE+R
Sbjct: 720 EARSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEIR 779

Query: 779 YKGKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVK 838
           YKGK+I EVL+MT+E+AREFFD VP +ARKLQTLMDVGLSYI+LGQSATTLSGGEAQRVK
Sbjct: 780 YKGKSIHEVLEMTIEEAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVK 839

Query: 839 LARELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVIKTAD 898
           L+RELSKRDTGKTLYILDEPTTGLHF DIQQLL VLHRLRDHGNTVVVIEHNLDVIKTAD
Sbjct: 840 LSRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTAD 899

Query: 899 WIIDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLL 939
           W++DLGPEGG  GG IIA GTPE VA++  SHT  FLKPLL
Sbjct: 900 WLVDLGPEGGSKGGQIIANGTPEQVAEMPQSHTGHFLKPLL 940