Pairwise Alignments

Query, 940 a.a., UvrABC system protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 939 a.a., excinuclease ABC, A subunit from Dechlorosoma suillum PS

 Score = 1348 bits (3489), Expect = 0.0
 Identities = 663/940 (70%), Positives = 788/940 (83%), Gaps = 2/940 (0%)

Query: 1   MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MD+I++RGARTHNLKNI+L +PRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDEIKIRGARTHNLKNISLDLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC 120
           ARQFL LMEKPDVD IEGLSPAISIEQK+TSHNPRSTVGT+TE++DYLRLLYAR G P C
Sbjct: 61  ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARAGTPYC 120

Query: 121 PEHQVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARID 180
           PEH  PL+AQT+SQMVD VL LPE +K+M+LA +V  RKGE +     L AQGF+R R+D
Sbjct: 121 PEHGEPLEAQTVSQMVDHVLALPEETKLMILAPVVANRKGEQLDLFTELRAQGFVRLRVD 180

Query: 181 GETCDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVVAPMEGD 240
           G   ++ + PKL   +KH I+V+VDR KVR D++QRLAESFETAL  + G  +   ME +
Sbjct: 181 GTIYEIDNLPKLAKSQKHNIDVVVDRLKVREDMRQRLAESFETALRHADGRAIALEMESN 240

Query: 241 GEEQIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDANLS 300
            +E +FSA FACP C Y+++ELEPRLFSFNNP GACP CDGLGV Q+FDP RV+   +LS
Sbjct: 241 -QEHLFSAKFACPICSYALQELEPRLFSFNNPMGACPKCDGLGVIQFFDPKRVVAHPDLS 299

Query: 301 LAQGAIRGWDQKNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIEFKYI 360
           LA GAIRGWD++N +YFQM+ +LAE+Y F V TPF++L+ ++++++L+GS +  + F+Y+
Sbjct: 300 LAAGAIRGWDKRNQFYFQMIGSLAEYYGFSVDTPFSELTDEVKQVLLYGSDKDLVPFQYM 359

Query: 361 NDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGTRLKIEARNV 420
           N+RG + LK+H FEGI+ NLERRY++T+S +VREELAKYISN  C +C+GTRL+ EAR+V
Sbjct: 360 NERGKLVLKEHAFEGIIPNLERRYKETDSLAVREELAKYISNTTCPTCEGTRLRQEARHV 419

Query: 421 FINDTALPTIVELSIADALTFFQELKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS 480
            +    L  I  L +A+A  +F+ ++L G +AQ+AEK++KEI  RLQFL+NVGL+YL+L 
Sbjct: 420 KVGSKTLHEISHLPLAEARDYFETIQLTGHKAQVAEKILKEITSRLQFLINVGLDYLSLD 479

Query: 481 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRNLGNTV 540
           RSAETLSGGEAQRIRLASQIG+GL GVMYVLDEPSIGLHQRDN+RLLQTL  LR++GNTV
Sbjct: 480 RSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLQTLRQLRDIGNTV 539

Query: 541 LVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVKKIAVP 600
           +VVEHDEDAIR AD+V+DIGPGAGVHGG +VAEG  +++  NP S+TG YLSG KKI VP
Sbjct: 540 IVVEHDEDAIRTADYVVDIGPGAGVHGGAIVAEGTPQQVTDNPASMTGDYLSGRKKIEVP 599

Query: 601 EQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHTA 660
           ++R   D +K +++ GA GNNLK+V L +PVGL TC+TGVSGSGKSTLINDT +  A   
Sbjct: 600 KKRRQADPEKKLQVIGAKGNNLKDVSLELPVGLMTCITGVSGSGKSTLINDTLYTAAAKH 659

Query: 661 LNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES 720
           L G +TA PA +  I GL+HFDKVI++DQSPIGRTPRSNPATYTG+ TPIRELFAG  E+
Sbjct: 660 LYG-STAEPAEHEEIIGLDHFDKVINVDQSPIGRTPRSNPATYTGLLTPIRELFAGVPEA 718

Query: 721 RSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYK 780
           RSRGY PGRFSFNV+GGRCEACQGDGVIKVEMHFLPD+YVPCDVC GKRYNRETLEV YK
Sbjct: 719 RSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCHGKRYNRETLEVHYK 778

Query: 781 GKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKLA 840
           GK+I +VL MTVE AREFFDPVPV+ARKLQTL+DVGLSYI LGQSATTLSGGEAQRVKLA
Sbjct: 779 GKSIYDVLQMTVEQAREFFDPVPVVARKLQTLVDVGLSYITLGQSATTLSGGEAQRVKLA 838

Query: 841 RELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVIKTADWI 900
            ELSKRDTG+TLYILDEPTTGLHF DI+ LL VLHRL DHGNTVVVIEHNLDVIKTADW+
Sbjct: 839 LELSKRDTGRTLYILDEPTTGLHFADIEMLLKVLHRLADHGNTVVVIEHNLDVIKTADWL 898

Query: 901 IDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLLN 940
           +DLGPEGG GGG IIA G PE V ++  SHT RFLKPLL+
Sbjct: 899 VDLGPEGGGGGGRIIAAGAPEAVVKVGESHTGRFLKPLLS 938