Pairwise Alignments

Query, 940 a.a., UvrABC system protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 946 a.a., excinuclease ABC, ATPase subunit (A) from Marinobacter adhaerens HP15

 Score = 1420 bits (3677), Expect = 0.0
 Identities = 682/939 (72%), Positives = 811/939 (86%), Gaps = 1/939 (0%)

Query: 1   MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MD I+++GARTHNLKNI+L +PRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLS Y
Sbjct: 1   MDHIQIKGARTHNLKNIDLDMPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC 120
           ARQFLS+MEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITE+YDYLRLL+AR GEPRC
Sbjct: 61  ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARAGEPRC 120

Query: 121 PEHQVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARID 180
           P+H  PL+AQTISQMVD+V+ +P  SK+M+LA ++++RKGEH++ +E + +QGFIR R+D
Sbjct: 121 PDHGQPLEAQTISQMVDQVVAMPADSKLMILAPVIRDRKGEHLQVIETMRSQGFIRVRVD 180

Query: 181 GETCDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVVAPMEGD 240
           G   D+ D P L+  +KH I+V+VDRFKV+  L+QRLAESFETAL+L+ GI +VAPM G+
Sbjct: 181 GTVYDIDDVPALDKKRKHQIDVVVDRFKVKPGLEQRLAESFETALDLADGIALVAPMSGE 240

Query: 241 GEEQIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDANLS 300
           GEEQ FSA +AC  CGY++ ELEP+LFSFNNPAGACPTCDGLGV+Q+FDP++++Q    +
Sbjct: 241 GEEQTFSARYACTQCGYALSELEPKLFSFNNPAGACPTCDGLGVKQFFDPEKIVQHPEAT 300

Query: 301 LAQGAIRGWDQKNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIEFKYI 360
           LA GAI+GWD++  YYFQML ++A+HY  D+ TP+  L +  + ++L GSG  +I F+Y+
Sbjct: 301 LASGAIKGWDRRAVYYFQMLGSVADHYGIDLETPWADLPEDFRNVLLFGSGDEDIPFRYV 360

Query: 361 NDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGTRLKIEARNV 420
           N RG I  K HPFEGIL NLERRYR+T+S S+REELA+ +S +PC  C G+RL+  AR+V
Sbjct: 361 NSRGHIMEKAHPFEGILPNLERRYRETDSQSMREELARNLSTQPCKECGGSRLRRSARHV 420

Query: 421 FINDTALPTIVELSIADALTFFQELKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS 480
           FI +  +  +  L + DA  +F+ L L G++ +IAEK++KE+  RLQFLVNVGL YL L 
Sbjct: 421 FIEEHNISDVTHLPVGDAHDYFETLALPGRKGEIAEKILKEVRQRLQFLVNVGLEYLTLE 480

Query: 481 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRNLGNTV 540
           RSA+TLSGGEAQRIRLASQIGAGLVGVMY+LDEPSIGLHQRDN+RLL TLTHLR+LGNTV
Sbjct: 481 RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLATLTHLRDLGNTV 540

Query: 541 LVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVKKIAVP 600
           +VVEHDEDAIR ADHVIDIGPGAGVHGG V+ +G  ++II NP+SLTGQYL+G ++IA+P
Sbjct: 541 IVVEHDEDAIRAADHVIDIGPGAGVHGGKVIGQGTPQQIIDNPDSLTGQYLNGTREIAIP 600

Query: 601 EQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHTA 660
           +QR  K + KT+ L GA GNNLK+V L +P+G+ TCVTGVSGSGKSTLIN T + +A   
Sbjct: 601 KQRN-KGSGKTLTLSGATGNNLKDVTLDLPLGIMTCVTGVSGSGKSTLINSTLYPVAAAK 659

Query: 661 LNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES 720
           LN AT+   APY+S++GL+H DKVIDIDQSPIGRTPRSNPATYTG+FTPIRELFAGTQE+
Sbjct: 660 LNKATSLNHAPYQSLKGLDHLDKVIDIDQSPIGRTPRSNPATYTGLFTPIRELFAGTQEA 719

Query: 721 RSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYK 780
           RSRGY+PGRFSFNV+GGRCEACQGDGVIKVEMHFLPD+YVPCDVCKGKRYNRETLEVRYK
Sbjct: 720 RSRGYKPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEVRYK 779

Query: 781 GKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKLA 840
           GK I+EVL+MTVE+ REFFD VP +ARKLQTLMDVGLSYIRLGQSA TLSGGEAQRVKLA
Sbjct: 780 GKNINEVLEMTVEEGREFFDAVPFLARKLQTLMDVGLSYIRLGQSAVTLSGGEAQRVKLA 839

Query: 841 RELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVIKTADWI 900
           +ELSKRDTGKTLYILDEPTTGLHF+DIQQLL+VL RLRDHGNT+VVIEHNLDVIKTADWI
Sbjct: 840 KELSKRDTGKTLYILDEPTTGLHFYDIQQLLNVLERLRDHGNTIVVIEHNLDVIKTADWI 899

Query: 901 IDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLL 939
           +DLGPEGG GGG IIAEGTPE+VA+  ASHT R+LKP+L
Sbjct: 900 VDLGPEGGSGGGQIIAEGTPEEVAENPASHTGRYLKPML 938