Pairwise Alignments

Query, 940 a.a., UvrABC system protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 968 a.a., excinuclease ABC subunit A from Caulobacter crescentus NA1000

 Score = 1160 bits (3001), Expect = 0.0
 Identities = 589/945 (62%), Positives = 737/945 (77%), Gaps = 10/945 (1%)

Query: 4   IEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63
           I VRGAR HNLK++++ IPR +L+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ
Sbjct: 8   IRVRGAREHNLKDVSVDIPRGELVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 67

Query: 64  FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPEH 123
           FL LM KPDVD IEGLSPAISIEQK+TS NPRSTVGT+TE++DY+RLL+ARVG P  P  
Sbjct: 68  FLELMSKPDVDLIEGLSPAISIEQKTTSRNPRSTVGTVTEIHDYMRLLWARVGIPYSPAT 127

Query: 124 QVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARIDGET 183
            +P+++QTISQMVDK+  LPEG+++ LLA +V++RKGE+ K + +    GF R +IDG+ 
Sbjct: 128 GLPIESQTISQMVDKITALPEGTRLYLLAPVVRDRKGEYKKEIADWQKAGFQRLKIDGQY 187

Query: 184 CDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVV---APMEGD 240
             + D P L+   KH I+V+VDR   + D++QRLA+S E AL L+ G+ V       EG+
Sbjct: 188 YPIEDAPALDKKFKHDIDVVVDRVVTKPDMEQRLADSIEQALRLADGLAVAEFATLEEGE 247

Query: 241 GEEQ--IFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDAN 298
            E +  +FS  FACP  G+++ E+EPRLFSFNNPAGACP CDGLG +  FD D VI D +
Sbjct: 248 TEPRRILFSERFACPVSGFTIAEIEPRLFSFNNPAGACPVCDGLGAKLAFDADLVIPDKD 307

Query: 299 LSLAQGAIRGWDQ-KNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIEF 357
            +L  GA+  W +  +  Y Q L ALA HY F +  P++KLS + ++++L+GS   +I+F
Sbjct: 308 RTLHGGAVAPWAKGPSPLYTQTLQALARHYGFSMDEPWHKLSTEARDVVLNGSKGAKIKF 367

Query: 358 KYINDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGTRLKIEA 417
            Y ++     ++K PFEG+L NLERR+R+T+S+ VREEL ++ S+ PC SC G RLK EA
Sbjct: 368 VYDDNARKYEVEK-PFEGVLPNLERRWRETDSSWVREELGRFQSDTPCESCHGKRLKPEA 426

Query: 418 RNVFINDTALPTIVELSIADALTFFQEL--KLEGQRAQIAEKVMKEINDRLQFLVNVGLN 475
             V ++   +  +  ++I  A  +F  L  KL  ++ +IA +++KEINDRL+FLV+VGL+
Sbjct: 427 LAVKVSGMDIAEVSMMAIRPARDWFAGLEGKLSDKQMEIARRILKEINDRLRFLVDVGLD 486

Query: 476 YLNLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRN 535
           YLN+SR + TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDN RLL +L  LR+
Sbjct: 487 YLNMSRGSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNTRLLTSLQGLRD 546

Query: 536 LGNTVLVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVK 595
           LGN+VLVVEHDE+AI  AD+VID+GP AGVHGG +VA+G   +I+ANP SLTGQYL+G +
Sbjct: 547 LGNSVLVVEHDEEAILTADYVIDMGPAAGVHGGEIVAQGKPADIMANPKSLTGQYLTGAR 606

Query: 596 KIAVPEQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFK 655
           +I VPEQR P   KK + + GA GNNLK V   IPVG FTC+TGVSG GKST   +T +K
Sbjct: 607 EIEVPEQRRPISKKKMLRVVGATGNNLKGVTAEIPVGTFTCITGVSGGGKSTFTIETLYK 666

Query: 656 IAHTALNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFA 715
            A   LN A+ A PAP+  I+GLEHFDKVIDIDQSPIGRTPRSNPATYTG F PIR+ FA
Sbjct: 667 AAARRLNNASDA-PAPHERIEGLEHFDKVIDIDQSPIGRTPRSNPATYTGAFGPIRDWFA 725

Query: 716 GTQESRSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETL 775
           G  ES++RGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPDVYV CD+CKGKRYNRETL
Sbjct: 726 GLPESKARGYGPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDICKGKRYNRETL 785

Query: 776 EVRYKGKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQ 835
           +V +KGKTI +VLDMTVE+A +FF  VP I  K++TL  VGLSYI++GQ ATTLSGGEAQ
Sbjct: 786 DVVFKGKTIADVLDMTVEEAADFFKAVPPIRDKMETLKRVGLSYIKVGQQATTLSGGEAQ 845

Query: 836 RVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVIK 895
           RVKL++ELSKR TG+TLYILDEPTTGLHF D ++LL VLH L D GNTVVVIEHNLDV+K
Sbjct: 846 RVKLSKELSKRATGRTLYILDEPTTGLHFEDTKKLLEVLHELADQGNTVVVIEHNLDVVK 905

Query: 896 TADWIIDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLLN 940
           TADW++D GPEGG GGG I+A G+P+DVA++EAS T R+LK LL+
Sbjct: 906 TADWLLDFGPEGGDGGGEIVAVGSPQDVAKVEASWTGRYLKELLD 950